RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 KLRB1Q12918 225 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 KRT33BQ14525 404 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 MLIPQ5VWP3 458 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 FAM45BPQ6NSW5 357 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CYS1Q717R9 158 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PCGF5Q86SE9 256 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SLC26A11Q86WA9 606 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PRSS58Q8IYP2 241 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ZBED8Q8IZ13 594 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 MFSD9Q8NBP5 474 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 NFAM1Q8NET5 270 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 B4GALNT2Q8NHY0 566 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ZCCHC10Q8TBK6 192 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 NT5CQ8TCD5 201 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 FAM45AQ8TCE6 357 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 UTP15Q8TED0 518 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 UBTD2Q8WUN7 234 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 LRRC45Q96CN5 670 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SNRNP40Q96DI7 357 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 WDR34Q96EX3 536 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ADAD1Q96M93 576 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 TSNARE1Q96NA8 513 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CSF3RQ99062 836 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 NAP1L3Q99457 506 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ELAC2Q9BQ52 826 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SLX1AQ9BQ83 275 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 LRRC1Q9BTT6 524 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SLC25A23Q9BV35 468 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 HES7Q9BYE0 225 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 DERL2Q9GZP9 239 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 FANCEQ9HB96 536 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PARVBQ9HBI1 364 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SAYSD1Q9NPB0 183 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CCDC177Q9NQR7 707 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 GPR83Q9NYM4 423 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 TRMT6Q9UJA5 497 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ANAPC5Q9UJX4 755 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ANAPC2Q9UJX6 822 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF225Q9UK10 706 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF490Q9ULM2 529 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CORO1CQ9ULV4 474 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 OARD1Q9Y530 152 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 LRP12Q9Y561 859 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 COMMD10Q9Y6G5 202 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 MAP1AP78559 2803 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 NF1P21359 2839 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 NINQ8N4C6 2090 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ZFHX3Q15911 3703 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 GOLGA6L10A0A0M3HER8 536 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TRBC2A0A5B9 178 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 A6NL46 340 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 E5RI56 91 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SGK494L7N484 410 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SRPX2O60687 465 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 GALR3O60755 368 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TNFRSF6BO95407 300 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ETHE1O95571 254 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CLDN1O95832 211 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CLPSP04118 112 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 HBQ1P09105 142 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CTAGE8P0CG41 777 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 GNLYP22749 145 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CMPK1P30085 196 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 RPA3P35244 121 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ARL4CP56559 192 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 RPS15P62841 145 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ABATP80404 500 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CDKL1Q00532 357 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SF3A3Q12874 501 aaKnown RBP eCLIP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 THOC5Q13769 683 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 RUNX2Q13950 521 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 FAM53BQ14153 422 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TGFBIQ15582 683 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 BTBD16Q32M84 506 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TTLL9Q3SXZ7 439 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TECRLQ5HYJ1 363 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 TCTE1Q5JU00 501 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 VWA5B1Q5TIE3 1220 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 H3F3CQ6NXT2 135 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF449Q6P9G9 518 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 DGAT2L6Q6ZPD8 337 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SH2D5Q6ZV89 423 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 RPS27LQ71UM5 84 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 SDCCAG8Q86SQ7 713 aaPredicted RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ISCA2Q86U28 154 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 THOC6Q86W42 341 aaKnown RBP4.5□□□□□ -1.69
SCAF11-214ENST00000550893 GPSM1Q86YR5 675 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CTAGE4Q8IX94 777 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 PDIK1LQ8N165 341 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 KIF2BQ8N4N8 673 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 MMGT1Q8N4V1 131 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 GPATCH11Q8N954 259 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 APCDD1LQ8NCL9 501 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 MDS2Q8NDY4 140 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 CATSPER1Q8NEC5 780 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 OR1N1Q8NGS0 311 aa4.5□□□□□ -1.69
SCAF11-214ENST00000550893 ANKRD7Q92527 254 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms