RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 GLIPR2Q9H4G4 154 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 LRTM1Q9HBL6 345 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 EML4Q9HC35 981 aaKnown RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 FAM120CQ9NX05 1096 aaKnown RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 JKAMPQ9P055 326 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 POLR3HQ9Y535 204 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 CLCA1A8K7I4 914 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 EEF1E1-BLOC1S5C9J1V9 151 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 AZIN1O14977 448 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 EEF1E1O43324 174 aaKnown RBP9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZIC3O60481 467 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 TBX19O60806 448 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 SOX30O94993 753 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 KCNH1O95259 989 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 PSMG1O95456 288 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 HSPA4LO95757 839 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 IL33O95760 270 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 FGF4P08620 206 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 PRPS2P11908 318 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 LCN1P31025 176 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 MC3RP41968 323 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 ASMTP46597 345 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 SLCO1A2P46721 670 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 ART1P52961 327 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 GAS1P54826 345 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 C17orf67Q0P5P2 114 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 FGFBP1Q14512 234 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 KIAA0040Q15053 153 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 SH2D4BQ5SQS7 431 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 DCST1Q5T197 706 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 DESI1Q6ICB0 168 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 TMEM107Q6UX40 140 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 R3HCC1LQ7Z5L2 792 aaKnown RBP9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 CAMKMTQ7Z624 323 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 GRAMD2AQ8IUY3 354 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 NATD1Q8N6N6 113 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 C9orf106Q8NAJ2 232 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 EFHD2Q96C19 240 aaPredicted RBP9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 MTERF3Q96E29 417 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 DACH2Q96NX9 599 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 CCT7Q99832 543 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 ANKRA2Q9H9E1 313 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 MKS1Q9NXB0 559 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 FBXL2Q9UKC9 423 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 CCL27Q9Y4X3 112 aa9.87□□□□□ -0.83
VTI1BP3-201ENST00000550220 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 DCHS2Q6V1P9 2916 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 SMIM23A6NLE4 172 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 TMEM114B3SHH9 223 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 PDPK1O15530 556 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 FADS1O60427 444 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 TACC2O95359 2948 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 SHBGP04278 402 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 DNASE1P24855 282 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 MAPK1P28482 360 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 GPC1P35052 558 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 SERPINB5P36952 375 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 RPL3P39023 403 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 CPA2P48052 419 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 STARP49675 285 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 LHX2P50458 406 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 HCFC1P51610 2035 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 MANFP55145 182 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 WNT3P56703 355 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 CLDN18P56856 261 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 FBXW10Q5XX13 1052 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 OR5M10Q6IEU7 315 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZCCHC12Q6PEW1 402 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 LRIG3Q6UXM1 1119 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 P4HA3Q7Z4N8 544 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 FADS6Q8N9I5 356 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 CDRT4Q8N9R6 151 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 OR4N2Q8NGD1 307 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 INTS12Q96CB8 462 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 PPCDCQ96CD2 204 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 PIGQQ9BRB3 760 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 GPATCH1Q9BRR8 931 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 YIPF4Q9BSR8 244 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 RBM24Q9BX46 236 aaKnown RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 TBL1XR1Q9BZK7 514 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 ROPN1BQ9BZX4 212 aaPredicted RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 DSN1Q9H410 356 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 REEP4Q9H6H4 257 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 L2HGDHQ9H9P8 463 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 ROPN1Q9HAT0 212 aaPredicted RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 ACSS1Q9NUB1 689 aaPredicted RBP9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 CLCF1Q9UBD9 225 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 PACSIN3Q9UKS6 424 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 CSMD2Q7Z408 3487 aa9.86□□□□□ -0.83
VTI1BP3-201ENST00000550220 ANKRD17O75179 2603 aaKnown RBP9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 TLDC2A0PJX2 215 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 MSTNO14793 375 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 CASKO14936 926 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 HCRTR2O43614 444 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 SCO2O43819 266 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 NPHS1O60500 1241 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 TNFRSF21O75509 655 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 HK1P19367 917 aa9.85□□□□□ -0.83
VTI1BP3-201ENST00000550220 TACR1P25103 407 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms