RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 DSN1Q9H410 356 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 ELOVL6Q9H5J4 265 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 CXorf56Q9H5V9 222 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 FARSBQ9NSD9 589 aaKnown RBP8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 PCTPQ9UKL6 214 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 UTS2RQ9UKP6 389 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 SLC12A4Q9UP95 1085 aa8.86□□□□□ -0.99
TRAFD1-207ENST00000550051 ATRQ13535 2644 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 H0YC42 278 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 FADS1O60427 444 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PDYNP01213 254 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ALDOAP04075 364 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 CTAGE8P0CG41 777 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 HK1P19367 917 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 IL12BP29460 328 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ARL1P40616 181 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 NR1H2P55055 460 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PLTPP55058 493 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 TPD52P55327 224 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 CORO7P57737 925 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 GNG11P61952 73 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 SIRPAP78324 504 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 TNK1Q13470 666 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 TMEM44Q2T9K0 475 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 CYP27C1Q4G0S4 372 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ANKRD34AQ69YU3 496 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 FAM180BQ6P0A1 224 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 NPSR1Q6W5P4 371 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 STAC2Q6ZMT1 411 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ZNF704Q6ZNC4 412 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 CTAGE4Q8IX94 777 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 UBQLNLQ8IYU4 475 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PLD6Q8N2A8 252 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 SPATA4Q8NEY3 305 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 FNDC9Q8TBE3 224 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 FBXO25Q8TCJ0 367 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 NANOS1Q8WY41 292 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ZC3HAV1LQ96H79 300 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 NSUN5Q96P11 429 aaKnown RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 NAPGQ99747 312 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 C1QTNF3Q9BXJ4 246 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PINK1Q9BXM7 581 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 KLHL4Q9C0H6 718 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 OR10A4Q9H209 315 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PTGES2Q9H7Z7 377 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ANKRA2Q9H9E1 313 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 TAS2R9Q9NYW1 312 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PPP4R1LQ9P1A2 415 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 VPS29Q9UBQ0 182 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 SNX6Q9UNH7 406 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 PROCRQ9UNN8 238 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 ABCG2Q9UNQ0 655 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 AP4B1Q9Y6B7 739 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 USF3Q68DE3 2245 aa8.85□□□□□ -0.99
TRAFD1-207ENST00000550051 OR2M5A3KFT3 312 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 OVOL3O00110 214 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 PPP6CO00743 305 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 HS3ST1O14792 307 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 RAD51CO43502 376 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 NME6O75414 186 aaPredicted RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 OTCP00480 354 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 COL6A2P12110 1019 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 FCGR2AP12318 317 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 HSD3B1P14060 373 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 HSD3B2P26439 372 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 EVI2BP34910 448 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 MPIP34949 423 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 ALDH9A1P49189 494 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 SERPINB8P50452 374 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 ATP5J2P56134 94 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 CLDN20P56880 219 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 RPS3AP61247 264 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 PSG6Q00889 435 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 PON3Q15166 354 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 ETFDHQ16134 617 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 ERCC6LQ2NKX8 1250 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 LINC01559Q495D7 138 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 ADAM5Q6NVV9 412 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 SLC44A2Q8IWA5 706 aaPredicted RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 C1orf52Q8N6N3 182 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 METTL25Q8N6Q8 603 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 OR4N2Q8NGD1 307 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 OR6K3Q8NGY3 331 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 UHMK1Q8TAS1 419 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 DUSP19Q8WTR2 217 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 SELENOMQ8WWX9 145 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 KAT2AQ92830 837 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 GFM2Q969S9 779 aaKnown RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 EFHD2Q96C19 240 aaPredicted RBP8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 C1GALT1C1Q96EU7 318 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 SHCBP1LQ9BZQ2 653 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 RTN4RQ9BZR6 473 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 VPS11Q9H270 941 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 FOLH1BQ9HBA9 442 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 SLC35C2Q9NQQ7 365 aa8.84□□□□□ -0.99
TRAFD1-207ENST00000550051 MED11Q9P086 117 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms