RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 OSGEPL1Q9H4B0 414 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ISG20L2Q9H9L3 353 aaKnown RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 EVA1BQ9NVM1 165 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ASB6Q9NWX5 421 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 UCKL1Q9NWZ5 548 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 AHSPQ9NZD4 102 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF624Q9P2J8 865 aaPredicted RBP12.88□□□□□ -0.35
HDAC7-228ENST00000548938 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 LIPT1Q9Y234 373 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 CACNG2Q9Y698 323 aa12.88□□□□□ -0.35
HDAC7-228ENST00000548938 A0A0G2JN53 185 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 TEX28O15482 410 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 CHST10O43529 356 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 DHFRP00374 187 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ANXA3P12429 323 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 FRKP42685 505 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 POU6F2P78424 691 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 CCNJQ5T5M9 372 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ZNF322Q6U7Q0 402 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 WASH2PQ6VEQ5 465 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 TMEM25Q86YD3 366 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 OR2AG1Q9H205 316 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 EMC7Q9NPA0 242 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 PTGFRNQ9P2B2 879 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 NFKBIL1Q9UBC1 381 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 MTCL1Q9Y4B5 1905 aaKnown RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 LOC105369274A0A096LPK9 316 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 OR5K3A6NET4 321 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 LEFTY2O00292 366 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 OR7A10O76100 309 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 SLC2A10O95528 541 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 CTSLP07711 333 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 TALDO1P37837 337 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 PRKAG1P54619 331 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 TAS2R41P59536 307 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 TSPAN31Q12999 210 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 FGFBP1Q14512 234 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ARHGAP15Q53QZ3 475 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 OR4N4Q8N0Y3 316 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 SIRT6Q8N6T7 355 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 OR52N1Q8NH53 320 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 GNPDA2Q8TDQ7 276 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 MS4A8Q9BY19 250 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 RANBP3Q9H6Z4 567 aaPredicted RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 DDX31Q9H8H2 851 aaKnown RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
HDAC7-228ENST00000548938 CBLCQ9ULV8 474 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
HDAC7-228ENST00000548938 NUP210Q8TEM1 1887 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 CPSF4LA6NMK7 179 aaKnown RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 WASH3PC4AMC7 463 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 NEDD8-MDP1E9PL57 170 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 SOCS6O14544 535 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 SURF4O15260 269 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 TBX19O60806 448 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RGS9O75916 674 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 IGHA1P01876 353 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RB1P06400 928 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 XPAP23025 273 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 SSTR2P30874 369 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 ACSM1Q08AH1 577 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 DBPQ10586 325 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RNASE12Q5GAN4 147 aaKnown RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 HBMQ6B0K9 141 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 FAM83HQ6ZRV2 1179 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 AMER3Q8N944 861 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RFKQ969G6 155 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 MSANTD3Q96H12 275 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 OR51J1Q9H342 316 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 CUEDC1Q9NWM3 386 aaPredicted RBP12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RPS10-NUDT3A0A1W2PQS6 291 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 FEZF1A0PJY2 475 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 K7ESM1 405 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RNF13O43567 381 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 LILRB5O75023 590 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 ALPPL2P10696 532 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 PTNP21246 168 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 AHCYP23526 432 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 THBS2P35442 1172 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 OR10A3P58181 314 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RPA4Q13156 261 aa12.86□□□□□ -0.35
HDAC7-228ENST00000548938 RASSF6Q6ZTQ3 369 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms