RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NRBF2Q96F24 287 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 HSH2DQ96JZ2 352 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 CHRNA10Q9GZZ6 450 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 ATP13A2Q9NQ11 1180 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 P4HTMQ9NXG6 502 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 IFT80Q9P2H3 777 aaPredicted RBP18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 SNX8Q9Y5X2 465 aa18.54■□□□□ 0.56
CTDSP2-204ENST00000548823 A6NHS1 94 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 G3V2T6 193 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 H0YAE9 185 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 GNGT2O14610 69 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 PGRMC2O15173 223 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 UBTFL6P0CB48 400 aaPredicted RBP18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 MPIP34949 423 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 HSPB3Q12988 150 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF169Q14929 603 aaPredicted RBP18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 SLC36A3Q495N2 470 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 SPDYE7PQ495Y7 208 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 ZC3H12BQ5HYM0 836 aaKnown RBP18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 OR2T5Q6IEZ7 315 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 FRMPD2BQ6IN97 320 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 REEP3Q6NUK4 255 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 FAM180AQ6UWF9 173 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 IGFL2Q6UWQ7 119 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 OR2T29Q8NH02 315 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 OR1L3Q8NH93 324 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 NFKBIDQ8NI38 313 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 SUN3Q8TAQ9 357 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 MIPOL1Q8TD10 442 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 LZICQ8WZA0 190 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 UCN3Q969E3 161 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 MAL2Q969L2 176 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 CNRIP1Q96F85 164 aaPredicted RBP18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 C7orf34Q96L11 122 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 C10orf90Q96M02 699 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 ZNF681Q96N22 645 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 ADI1Q9BV57 179 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 NPLQ9BXD5 320 aaPredicted RBP18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 SLC7A5P2Q9GIP4 190 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 GABARAPL1Q9H0R8 117 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 UBAP1Q9NZ09 502 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 BAG5Q9UL15 447 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 DAPP1Q9UN19 280 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 DOCK10Q96BY6 2186 aa18.53■□□□□ 0.56
CTDSP2-204ENST00000548823 DNHD1Q96M86 4753 aa18.52■□□□□ 0.56
CTDSP2-204ENST00000548823 LOC105369274A0A096LPK9 316 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 LOC102723532A0A0G2JNH3 316 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 TMEM229AB2RXF0 380 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 B4GALT2O60909 372 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 ALPLP05186 524 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 IFI6P09912 130 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 PVRP15151 417 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 TLX1P31314 330 aaPredicted RBP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 NCBP2P52298 156 aaKnown RBP eCLIP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 KRTAP10-9P60411 292 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 KCNJ10P78508 379 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 IQCCQ4KMZ1 466 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 C18orf63Q68DL7 685 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 OR52E8Q6IFG1 317 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 SHQ1Q6PI26 577 aaKnown RBP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 TBPL2Q6SJ96 375 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 OR4N4Q8N0Y3 316 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 DHRSXQ8N5I4 330 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 HORMAD2Q8N7B1 307 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 C19orf47Q8N9M1 422 aaKnown RBP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 OR56A1Q8NGH5 318 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 CCDC120Q96HB5 630 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 CNBD2Q96M20 576 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 RBM4BQ9BQ04 359 aaKnown RBP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 RBM4Q9BWF3 364 aaKnown RBP18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 ZNF696Q9H7X3 374 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 ZNF780BQ9Y6R6 833 aa18.52■□□□□ 0.55
CTDSP2-204ENST00000548823 ANKHD1Q8IWZ3 2542 aaKnown RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 TMEM150CB9EJG8 249 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 MASP2O00187 686 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 SRPX2O60687 465 aaPredicted RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 PDE9AO76083 593 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 TNFAIP8O95379 198 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 MSL3P1P0C860 447 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 CDH3P22223 829 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 CPN2P22792 545 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 MYF6P23409 242 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 GPC1P35052 558 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 CAPGP40121 348 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 FOLR3P41439 243 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 LIM2P55344 173 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 PPP2R2BQ00005 443 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 ZNF385CQ66K41 422 aaPredicted RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 NIPAL1Q6NVV3 410 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 MTFR2Q6P444 385 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 RPTNQ6XPR3 784 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 STK32CQ86UX6 486 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 ZC3H7AQ8IWR0 971 aaKnown RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 BCORP1Q8N888 145 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 MAGEE2Q8TD90 523 aaPredicted RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 SLC35G5Q96KT7 338 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 NTMQ9P121 344 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 SERTAD3Q9UJW9 196 aa18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 PTRH2Q9Y3E5 179 aaKnown RBP18.51■□□□□ 0.55
CTDSP2-204ENST00000548823 SPACA6W5XKT8 324 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms