RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 DACH2Q96NX9 599 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 WFIKKN1Q96NZ8 548 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 HS3ST6Q96QI5 342 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 KLHDC3Q9BQ90 382 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 C12orf65Q9H3J6 166 aaKnown RBP13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 KLHL28Q9NXS3 571 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 PACSIN3Q9UKS6 424 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 NFU1Q9UMS0 254 aa13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 POLR3HQ9Y535 204 aaPredicted RBP13.73□□□□□ -0.21
SNX29P1-201ENST00000548357 GXYLT2A0PJZ3 443 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GMFGO60234 142 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 SMNDC1O75940 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 PSMG1O95456 288 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 IGKV1D-16P01601 117 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 ANXA4P09525 319 aaPredicted RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CHMP24386 653 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 LOXP28300 417 aaPredicted RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GCKP35557 465 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 KIR2DL2P43627 348 aaPredicted RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CLDN20P56880 219 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 C2orf80Q0P641 193 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 LCP2Q13094 533 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GAB1Q13480 694 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 EFR3AQ14156 821 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 FAM71E1Q6IPT2 247 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GALNT18Q6P9A2 607 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 APOOLQ6UXV4 268 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 ZNF550Q7Z398 422 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GSPT2Q8IYD1 628 aaKnown RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CIARTQ8N365 385 aaPredicted RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CNEP1R1Q8N9A8 125 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 OR4K17Q8NGC6 315 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 ZNF592Q92610 1267 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 MARK4Q96L34 752 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 GLIPR2Q9H4G4 154 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 NMRK1Q9NWW6 199 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 PPP4R1LQ9P1A2 415 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 MRPS18CQ9Y3D5 142 aaKnown RBP13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 ZNF337Q9Y3M9 751 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 PTGDR2Q9Y5Y4 395 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CSPG4Q6UVK1 2322 aa13.72□□□□□ -0.21
SNX29P1-201ENST00000548357 CR1P17927 2039 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 A0A1W2PPM1 405 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 OR2M5A3KFT3 312 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 G3V2L1 256 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 UPK1AO00322 258 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 SEC14L5O43304 696 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 RIPK2O43353 540 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 ABCB7O75027 752 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 BCAS2O75934 225 aaPredicted RBP13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 CGAP01215 116 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 ABHD2P08910 425 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 PYGBP11216 843 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 HK1P19367 917 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 TAC1P20366 129 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 DDCP20711 480 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 NCBP2P52298 156 aaKnown RBP eCLIP13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 DSCR4P56555 118 aaPredicted RBP13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 RAET1LQ5VY80 246 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 AAGABQ6PD74 315 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 GALNT10Q86SR1 603 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 MARCH3Q86UD3 253 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 GBP7Q8N8V2 638 aaPredicted RBP13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 EGLN2Q96KS0 407 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 BBS4Q96RK4 519 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 TXLNGYQ9BZA5 131 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 SHCBP1LQ9BZQ2 653 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 PIGMQ9H3S5 423 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 MID1IP1Q9NPA3 183 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 SENP1Q9P0U3 644 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 OR10H1Q9Y4A9 318 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 JMJD1CQ15652 2540 aa13.71□□□□□ -0.21
SNX29P1-201ENST00000548357 SERTM1A2A2V5 107 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 H3BML4 177 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 ENO1P06733 434 aaKnown RBP13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 FOSL1P15407 271 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 KRT20P35900 424 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 RFX3P48380 749 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 PKNOX1P55347 436 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 LTBQ06643 244 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 ZNF763Q0D2J5 394 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 HEPACAMQ14CZ8 416 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 GUSBP1Q15486 140 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 ZNF385BQ569K4 471 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 SPDYAQ5MJ70 313 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 ZNF551Q7Z340 670 aaPredicted RBP13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 P4HA3Q7Z4N8 544 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 CCNYL1Q8N7R7 359 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 FNDC9Q8TBE3 224 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 SMPDL3BQ92485 455 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 PGM2Q96G03 612 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 AMDHD1Q96NU7 426 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 PINK1Q9BXM7 581 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 SIRT5Q9NXA8 310 aa13.7□□□□□ -0.22
SNX29P1-201ENST00000548357 TAS2R9Q9NYW1 312 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms