RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 YIPF4Q9BSR8 244 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 OR8D2Q9GZM6 311 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CXorf21Q9HAI6 301 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 EQTNQ9NQ60 294 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ARMC1Q9NVT9 282 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 PLA2G3Q9NZ20 509 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 STOML1Q9UBI4 398 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 AURKCQ9UQB9 309 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ANGPT4Q9Y264 503 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CLCA3PQ9Y6N3 262 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CPAMD8Q8IZJ3 1885 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 TRBV11-1A0A0K0K1C0 115 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 TMEM247A6NEH6 219 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 TFPTP0C1Z6 253 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 CT62P0C5K7 136 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 MAN2A2P49641 1150 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 REEP3Q6NUK4 255 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 MFSD12Q6NUT3 480 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 CCDC80Q76M96 950 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 LGI4Q8N135 537 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 VWA5B2Q8N398 1253 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 METTL25Q8N6Q8 603 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 APCDD1LQ8NCL9 501 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 PAPD5Q8NDF8 572 aaKnown RBP16.09■□□□□ 0.17
HDAC7-227ENST00000548080 FBXO30Q8TB52 745 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 XAGE5Q8WWM1 108 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 UGT2B28Q9BY64 529 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 ZNF223Q9UK11 482 aaPredicted RBP16.09■□□□□ 0.17
HDAC7-227ENST00000548080 RPS6KA6Q9UK32 745 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 ZNF451Q9Y4E5 1061 aa16.09■□□□□ 0.17
HDAC7-227ENST00000548080 COL6A6A6NMZ7 2263 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 C5orf58C9J3I9 102 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 ASNA1O43681 348 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 PRKNO60260 465 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 ICAM2P13598 275 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 SESN3P58005 492 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 NADK2Q4G0N4 442 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 LRRC23Q53EV4 343 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 TBCELQ5QJ74 424 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 CDC73Q6P1J9 531 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 ENPP6Q6UWR7 440 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 PQLC1Q8N2U9 271 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 LSM14AQ8ND56 463 aaKnown RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 B3GNT7Q8NFL0 401 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 OR5D16Q8NGK9 328 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 SLC2A12Q8TD20 617 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 ELP5Q8TE02 316 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 OR7D2Q96RA2 312 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 SEPHS2Q99611 448 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 LIN28AQ9H9Z2 209 aaKnown RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 MMP25Q9NPA2 562 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 C6orf203Q9P0P8 240 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 P2RX2Q9UBL9 471 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF639Q9UID6 485 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 SAMD4AQ9UPU9 718 aaKnown RBP16.08■□□□□ 0.16
HDAC7-227ENST00000548080 V9GYQ6 96 aa16.08■□□□□ 0.16
HDAC7-227ENST00000548080 DUXAA6NLW8 204 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 HNRNPRO43390 633 aaKnown RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 GCM2O75603 506 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 PRKD3O94806 890 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 DDAH2O95865 285 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 CBX7O95931 251 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ALPPP05187 535 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 BCHEP06276 602 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 SFTPCP11686 197 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 S1PR1P21453 382 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 CHRNB3Q05901 458 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF267Q14586 743 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 EXOSC7Q15024 291 aaKnown RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 FAM98BQ52LJ0 330 aaKnown RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ZCCHC12Q6PEW1 402 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ISLR2Q6UXK2 745 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 C16orf47Q6ZP98 133 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 EIF3MQ7L2H7 374 aaKnown RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 SLC44A2Q8IWA5 706 aaPredicted RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF843Q8N446 348 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 RBMXL3Q8N7X1 1067 aaKnown RBP16.07■□□□□ 0.16
HDAC7-227ENST00000548080 SIMC1Q8NDZ2 872 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 ADAMTS15Q8TE58 950 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 TMEM19Q96HH6 336 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 PYURFQ96I23 114 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 CNPPD1Q9BV87 410 aa16.07■□□□□ 0.16
HDAC7-227ENST00000548080 SYNDIG1LA6NDD5 238 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 SLC28A2O43868 658 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 COQ9O75208 318 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 ZNF682O95780 498 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 AGR2O95994 175 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 IFNA14P01570 189 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 NR2F1P10589 423 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 HOXB6P17509 224 aaKnown RBP16.06■□□□□ 0.16
HDAC7-227ENST00000548080 AQP1P29972 269 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 GCKP35557 465 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 CLCN2P51788 898 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 GPR143P51810 404 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 PCBP3P57721 371 aaKnown RBP16.06■□□□□ 0.16
HDAC7-227ENST00000548080 ELOAQ14241 798 aaKnown RBP16.06■□□□□ 0.16
HDAC7-227ENST00000548080 GNA13Q14344 377 aa16.06■□□□□ 0.16
HDAC7-227ENST00000548080 CRB2Q5IJ48 1285 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms