RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 ASMTP46597 345 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 PSMD4P55036 377 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 RPL38P63173 70 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 PDE7AQ13946 482 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 SH2D4BQ5SQS7 431 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 AAGABQ6PD74 315 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 ARSKQ6UWY0 536 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF551Q7Z340 670 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 RELL2Q8NC24 303 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 TWIST2Q8WVJ9 160 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 TSSK3Q96PN8 268 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 UCN2Q96RP3 112 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 TRIB1Q96RU8 372 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 C3orf14Q9HBI5 128 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 SDHAF3Q9NRP4 125 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 ACSS1Q9NUB1 689 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 NTMQ9P121 344 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 FOXD3Q9UJU5 478 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 L3MBTL1Q9Y468 752 aa16.94■□□□□ 0.3
CHMP1A-203ENST00000547614 CCDC168Q8NDH2 2452 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 ZIC3O60481 467 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 IL33O95760 270 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 IL18BPO95998 194 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 PRPS2P11908 318 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 DDX5P17844 614 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 DPP4P27487 766 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 ASCL1P50553 236 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF136P52737 540 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 MANFP55145 182 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 DSCR4P56555 118 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 WNT3P56703 355 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 HSPB3Q12988 150 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 MYBPHQ13203 477 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 VPS26BQ4G0F5 336 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 OR5M10Q6IEU7 315 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 R3HCC1LQ7Z5L2 792 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 ADGRE4PQ86SQ3 457 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 DDIASQ8IXT1 998 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 MREGQ8N565 214 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 CEP70Q8NHQ1 597 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 HOXB13Q92826 284 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 PPP3R2Q96LZ3 170 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 ZFP3Q96NJ6 502 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 FAM120CQ9NX05 1096 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 SH3BP4Q9P0V3 963 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 BAIAP2L1Q9UHR4 511 aa16.93■□□□□ 0.3
CHMP1A-203ENST00000547614 TMEM114B3SHH9 223 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 TMEM233B4DJY2 109 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 PIP5K1BO14986 540 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 AKAP10O43572 662 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 TYROBPO43914 113 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 BCKDHAP12694 445 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 CTSSP25774 331 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 GPC1P35052 558 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 OPRM1P35372 400 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 MAP3K8P41279 467 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 CLK3P49761 638 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 LHX2P50458 406 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 BCL2A1Q16548 175 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 GALNTL6Q49A17 601 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF385BQ569K4 471 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 ANKRD26P1Q6NSI1 321 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 LRIG3Q6UXM1 1119 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 FADS6Q8N9I5 356 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 OR4K17Q8NGC6 315 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 OR6Y1Q8NGX8 325 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 RNASE6Q93091 150 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 CIDECQ96AQ7 238 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 TM9SF2Q99805 663 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 SH3GL2Q99962 352 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 TUBA1CQ9BQE3 449 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 PPP4R1LQ9P1A2 415 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 DKKL1Q9UK85 242 aa16.92■□□□□ 0.3
CHMP1A-203ENST00000547614 B4DXG7 233 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 H0Y3Z8 333 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF500O60304 480 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 NKX2-2O95096 273 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 KCNH1O95259 989 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 BPGMP07738 259 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 MAPK1P28482 360 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 GABRA3P34903 492 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 XKR7Q5GH72 579 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 ZCCHC23Q6ZST2 131 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 CDRT4Q8N9R6 151 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 WNT2BQ93097 391 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 SFXN2Q96NB2 322 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 DSN1Q9H410 356 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 ATP6V1HQ9UI12 483 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 SPG11Q96JI7 2443 aa16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 ANKHD1Q8IWZ3 2542 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-203ENST00000547614 DOCK7Q96N67 2140 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 SCO2O43819 266 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 CREB1P16220 341 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 ZNF708P17019 499 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 UQCRC1P31930 480 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 RPL3P39023 403 aaKnown RBP16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 ETV4P43268 484 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 KIR2DL3P43628 341 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 STARP49675 285 aa16.9■□□□□ 0.3
CHMP1A-203ENST00000547614 SRYQ05066 204 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms