RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 GPR135Q8IZ08 494 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 OR2A12Q8NGT7 310 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 DNAJB8Q8NHS0 232 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 ADAMTS19Q8TE59 1207 aa13.78□□□□□ -0.2
HOXC11-202ENST00000546378 LILRB3O75022 631 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 PRG2P13727 222 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 TRIM23P36406 574 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 CHRNEQ04844 493 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 EIF4HQ15056 248 aaKnown RBP13.77□□□□□ -0.2
HOXC11-202ENST00000546378 C18orf63Q68DL7 685 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 OR2T35Q8NGX2 323 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 ALG14Q96F25 216 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 RIPOR3Q96MK2 946 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 ZSWIM3Q96MP5 696 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 CLEC4MQ9H2X3 399 aaPredicted RBP13.77□□□□□ -0.2
HOXC11-202ENST00000546378 ATP13A2Q9NQ11 1180 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 OR51B4Q9Y5P0 310 aa13.77□□□□□ -0.2
HOXC11-202ENST00000546378 RNASET2O00584 256 aaKnown RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 RASGRP1O95267 797 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SIX6O95475 246 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 PSMB10P40306 273 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 AGFG1P52594 562 aaKnown RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 POLR2LP62875 67 aaKnown RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SIGIRRQ6IA17 410 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SLC27A4Q6P1M0 643 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 LINGO2Q7L985 606 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 CEACAM19Q7Z692 300 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 TMEM255BQ8WV15 326 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SENP5Q96HI0 755 aaPredicted RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SLC38A2Q96QD8 506 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 FERD3LQ96RJ6 166 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 KLHL31Q9H511 634 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 H0YC42 278 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SCO2O43819 266 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 DOK2O60496 412 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 B4GALT2O60909 372 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 ARAFP10398 606 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 GCGRP47871 477 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 GPR176Q14439 515 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 AKIRIN2Q53H80 203 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SLC25A25Q6KCM7 469 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 FAM83HQ6ZRV2 1179 aaPredicted RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 NLRC5Q86WI3 1866 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 OR8D4Q8NGM9 314 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 ST8SIA2Q92186 375 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 TFGQ92734 400 aaPredicted RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 TRMT2BQ96GJ1 504 aaKnown RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 THAP7Q9BT49 309 aaPredicted RBP13.77□□□□□ -0.21
HOXC11-202ENST00000546378 SPATA9Q9BWV2 254 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 CDCA4Q9BXL8 241 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 PRDM9Q9NQV7 894 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 TNFRSF10DQ9UBN6 386 aa13.77□□□□□ -0.21
HOXC11-202ENST00000546378 DAPL1A0PJW8 107 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 E9PI62 339 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 GFYI3L273 518 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 HMGN4O00479 90 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 PTPN2P17706 415 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 VIPR2P41587 438 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 MC3RP41968 323 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 SLC25A35Q3KQZ1 300 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 FNDC3BQ53EP0 1204 aaKnown RBP13.76□□□□□ -0.21
HOXC11-202ENST00000546378 YIF1BQ5BJH7 314 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 LILRA6Q6PI73 481 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 RNF44Q7L0R7 432 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 LAS2Q8IYD9 372 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 SMPDL3AQ92484 453 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 AP3S1Q92572 193 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 OTUB2Q96DC9 234 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 FOXN4Q96NZ1 517 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 ING4Q9UNL4 249 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 A0A075B6Q4 140 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 A0A087WUU8 490 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 MID1O15344 667 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 C1orf105O95561 183 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 EIF4EP06730 217 aaKnown RBP13.76□□□□□ -0.21
HOXC11-202ENST00000546378 SOX2P48431 317 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 GZMKP49863 264 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 AKR1D1P51857 326 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
HOXC11-202ENST00000546378 MLIPQ5VWP3 458 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 FIGNL1Q6PIW4 674 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 ADGRF3Q8IZF5 1079 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 ANKHQ9HCJ1 492 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 PLEKHM1Q9Y4G2 1056 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 SCN8AQ9UQD0 1980 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
HOXC11-202ENST00000546378 TRAV27A0A087WT01 109 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 PLATP00750 562 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 SEMG1P04279 462 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 NAT1P18440 290 aa13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ERP29P30040 261 aaKnown RBP13.75□□□□□ -0.21
HOXC11-202ENST00000546378 ST8SIA6P61647 398 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms