RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 OR5P2Q8WZ92 322 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 VPS33AQ96AX1 596 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CTHRC1Q96CG8 243 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SPDL1Q96EA4 605 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 THOC3Q96J01 351 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CCDC115Q96NT0 180 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 OR52E6Q96RD3 313 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 NUDT9Q9BW91 350 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ITPAQ9BY32 194 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 WWTR1Q9GZV5 400 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ANKRA2Q9H9E1 313 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SAR1AQ9NR31 198 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SIRT3Q9NTG7 399 aaPredicted RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ZCCHC3Q9NUD5 404 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 TMEM45AQ9NWC5 275 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CCDC167Q9P0B6 97 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PTGFRNQ9P2B2 879 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF639Q9UID6 485 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 TEKT2Q9UIF3 430 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CFL2Q9Y281 166 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 DTX4Q9Y2E6 619 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PCDHGA9Q9Y5G4 932 aaKnown RBP5.86□□□□□ -1.47
PRKDC-211ENST00000546304 SNX8Q9Y5X2 465 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 CAPN7Q9Y6W3 813 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 EML6Q6ZMW3 1958 aa5.86□□□□□ -1.47
PRKDC-211ENST00000546304 PRSS51A0A1B0GVH4 220 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 DYTNA2CJ06 578 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ASPDHA6ND91 283 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CCDC154A6NI56 674 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 UPK1AO00322 258 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FCHO1O14526 889 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SLC22A2O15244 555 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CFLARO15519 480 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PRKNO60260 465 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SCN2BO60939 215 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ZFAND5O76080 213 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 S1PR1P21453 382 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CCL11P51671 97 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 LINC00310P59036 64 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PHC1P78364 1004 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 LRRC74AQ0VAA2 488 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 KCNAB2Q13303 367 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 MFAP5Q13361 173 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 TP53BP2Q13625 1128 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 MAPRE2Q15555 327 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 NNATQ16517 81 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SPDYE7PQ495Y7 208 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 TRMT12Q53H54 448 aaKnown RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CRB2Q5IJ48 1285 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ACER2Q5QJU3 275 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 C6orf10Q5SRN2 563 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ABHD17BQ5VST6 288 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 AGAP7PQ5VUJ5 663 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 B3GNTL1Q67FW5 361 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FCRLBQ6BAA4 426 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 TCTN3Q6NUS6 607 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FUNDC1Q8IVP5 155 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CPSF7Q8N684 471 aaKnown RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF615Q8N8J6 731 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF441Q8N8Z8 693 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SIMC1Q8NDZ2 872 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 VPS37AQ8NEZ2 397 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 NUP43Q8NFH3 380 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 OR56A1Q8NGH5 318 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 OR5AK3PQ8NH89 298 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FBXO30Q8TB52 745 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 THAP3Q8WTV1 239 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PSMF1Q92530 271 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 MOAP1Q96BY2 351 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ELP4Q96EB1 424 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FAM120BQ96EK7 910 aaKnown RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 MAGED4Q96JG8 741 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 VSTM2LQ96N03 204 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 AGAP4Q96P64 663 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 BTBD9Q96Q07 612 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PANX1Q96RD7 426 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CCT8L2Q96SF2 557 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 NPAS2Q99743 824 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SLC25A23Q9BV35 468 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 DEFB126Q9BYW3 111 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 OR10A5Q9H207 317 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 EPS8L2Q9H6S3 715 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 CXorf36Q9H7Y0 433 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 RMND5AQ9H871 391 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 FOLH1BQ9HBA9 442 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 EQTNQ9NQ60 294 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 SERHLQ9NQF3 203 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 TAS2R9Q9NYW1 312 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ARMCX1Q9P291 453 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ABI3Q9P2A4 366 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PRODH2Q9UF12 536 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 BCAP29Q9UHQ4 241 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 BTNL2Q9UIR0 455 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 TUBD1Q9UJT1 453 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 PCDHGB4Q9UN71 923 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 C19orf53Q9UNZ5 99 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ARL2BPQ9Y2Y0 163 aa5.85□□□□□ -1.47
PRKDC-211ENST00000546304 HEMK1Q9Y5R4 338 aaPredicted RBP5.85□□□□□ -1.47
PRKDC-211ENST00000546304 ZNF462Q96JM2 2506 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms