RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 OR4Q3Q8NH05 313 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ZSWIM3Q96MP5 696 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 FCRL4Q96PJ5 515 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 RBP7Q96R05 134 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ABHD1Q96SE0 405 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 DDX31Q9H8H2 851 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 H2AFY2Q9P0M6 372 aaPredicted RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 COPZ2Q9P299 210 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 MAB21L2Q9Y586 359 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 GSAPA4D1B5 854 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 RFXAPO00287 272 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 GPR171O14626 319 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 TSPAN4O14817 238 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 CASC3O15234 703 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 GRM6O15303 877 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 SSNA1O43805 119 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 SERPINI2O75830 405 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 OLFM2O95897 454 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 RB1P06400 928 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 XPAP23025 273 aaPredicted RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 SHC1P29353 583 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 RNF144AP50876 292 aaPredicted RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 BDH1Q02338 343 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 SLC36A2Q495M3 483 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 RNASE12Q5GAN4 147 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 KHDRBS2Q5VWX1 349 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 SFXN4Q6P4A7 337 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 TOR1AIP2Q8NFQ8 470 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 TRMT10AQ8TBZ6 339 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 GIMAP1Q8WWP7 306 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ADAMTS14Q8WXS8 1223 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 OSTF1Q92882 214 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ART5Q96L15 291 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PPA2Q9H2U2 334 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
SRP54-202ENST00000546080 DLL4Q9NR61 685 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 TDP1Q9NUW8 608 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 SCP2D1Q9UJQ7 156 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 FKBP7Q9Y680 259 aa13.32□□□□□ -0.28
SRP54-202ENST00000546080 PLXND1Q9Y4D7 1925 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 PI15O43692 258 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SULT1A3P0DMM9 295 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SULT1A4P0DMN0 295 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 THBS2P35442 1172 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 RECQLP46063 649 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 KHKP50053 298 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 PUDPQ08623 228 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 TRAM2Q15035 370 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CDC73Q6P1J9 531 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 FAM122CQ6P4D5 195 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 HTR3DQ70Z44 454 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 GPAT4Q86UL3 456 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 C2orf73Q8N5S3 287 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 OR51G2Q8NGK0 314 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 PIGXQ8TBF5 258 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 RBPMSQ93062 196 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 ZNF689Q96CS4 500 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 CACNG6Q9BXT2 260 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 ZCCHC3Q9NUD5 404 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 LYARQ9NX58 379 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 MARK1Q9P0L2 795 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CXorf51AA0A1B0GTR3 108 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CPSF4LA6NMK7 179 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 FZD7O75084 574 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CFDP00746 253 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 CHRM4P08173 479 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CD3GP09693 182 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 H2AFB2P0C5Z0 115 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CST5P28325 142 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 BSGP35613 385 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 MMP12P39900 470 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 EPHB3P54753 998 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 OR10A3P58181 314 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SHC2P98077 582 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CRYZQ08257 329 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 BAMBIQ13145 260 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 GSG1Q2KHT4 349 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 BHLHB9Q6PI77 547 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SIAH3Q8IW03 269 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SIRT6Q8N6T7 355 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SUN3Q8TAQ9 357 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 RADILQ96JH8 1075 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 LMLNQ96KR4 655 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 CAMK1GQ96NX5 476 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 ERMAPQ96PL5 475 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 PINK1Q9BXM7 581 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 B3GNT4Q9C0J1 378 aa13.31□□□□□ -0.28
SRP54-202ENST00000546080 SPRTNQ9H040 489 aaPredicted RBP13.31□□□□□ -0.28
SRP54-202ENST00000546080 MED17Q9NVC6 651 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms