RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 BCHEP06276 602 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 CORO7P57737 925 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 RPP38P78345 283 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 FLOT2Q14254 428 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 MEP1AQ16819 746 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 TMEM81Q6P7N7 255 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 RPS19BP1Q86WX3 136 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 C10orf111Q8N326 155 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 TTC9Q92623 222 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 DIO2Q92813 273 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 RAB8BQ92930 207 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC35B4Q969S0 331 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 RPS6KA6Q9UK32 745 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 SAMD4AQ9UPU9 718 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 WDR45Q9Y484 360 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 FREM2Q5SZK8 3169 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 MED13Q9UHV7 2174 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 ACOT8O14734 319 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ARPC2O15144 300 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 EFSO43281 561 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 THBS1P07996 1170 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 NUDT7P0C024 238 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 UMPSP11172 480 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ABCD3P28288 659 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 KDELR2P33947 212 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 NR0B1P51843 470 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 MLF1P58340 268 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 KCNJ2P63252 427 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 PLCXD2Q0VAA5 305 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 FUT5Q11128 374 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 GPAT3Q53EU6 434 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 GLYATQ6IB77 296 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 CCDC81Q6ZN84 652 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 SPACA3Q8IXA5 215 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 CMIPQ8IY22 773 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF619Q8N2I2 560 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 RNF148Q8N7C7 305 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 BCORP1Q8N888 145 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF527Q8NB42 609 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 NFKBIDQ8NI38 313 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 SPPL2AQ8TCT8 520 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 LZICQ8WZA0 190 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 UTP4Q969X6 686 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 CCDC124Q96CT7 223 aaKnown RBP14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 RMND5BQ96G75 393 aaPredicted RBP14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 LRGUKQ96M69 825 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 NSMCE2Q96MF7 247 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 YIPF4Q9BSR8 244 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 TRIM8Q9BZR9 551 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC38A1Q9H2H9 487 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ARMC7Q9H6L4 198 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 ABCG2Q9UNQ0 655 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 NPFFR2Q9Y5X5 522 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 GPC6Q9Y625 555 aaPredicted RBP14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 PTPRQQ9UMZ3 2332 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 PCSK5Q92824 1860 aa14.79□□□□□ -0.04
PRPF40A-212ENST00000545856 TMEM200CA6NKL6 621 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 TSPAN2O60636 221 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 PPM1BO75688 479 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 PDE5AO76074 875 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 H6PDO95479 791 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 DBIP07108 87 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 FBXO45P0C2W1 286 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 IL12BP29460 328 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 SYPL1Q16563 259 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 C1orf146Q5VVC0 180 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 TYW3Q6IPR3 259 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 FRRS1Q6ZNA5 592 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 NUP54Q7Z3B4 507 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 PEX5LQ8IYB4 626 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 GALNT16Q8N428 558 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 SNRNP27Q8WVK2 155 aaKnown RBP14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 CLPTM1LQ96KA5 538 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 SGCZQ96LD1 299 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 COL21A1Q96P44 957 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 MESP1Q9BRJ9 268 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 RNF32Q9H0A6 362 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 UBQLN4Q9NRR5 601 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 ADPRHL2Q9NX46 363 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 BAG5Q9UL15 447 aa14.78□□□□□ -0.04
PRPF40A-212ENST00000545856 NINQ8N4C6 2090 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 CNTRLQ7Z7A1 2325 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 A0A087WV48 116 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 A0A1W2PQD3 144 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 PRAMEF27A3QJZ7 478 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 SYT5O00445 386 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 TP53I11O14683 189 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 C1QCP02747 245 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 GPIP06744 558 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 C8BP07358 591 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 CHRM4P08173 479 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 ITGAMP11215 1152 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 TCN1P20061 433 aaPredicted RBP14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 RPS4Y1P22090 263 aaKnown RBP14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 PRKAR1BP31321 381 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 SOX11P35716 441 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 SSR4P51571 173 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 TMPRSS3P57727 454 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 ACTR3P61158 418 aa14.77□□□□□ -0.04
PRPF40A-212ENST00000545856 LARS2Q15031 903 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms