RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 JPH3Q8WXH2 748 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 TSACCQ96A04 125 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 BTBD2Q9BX70 525 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 VNN3Q9NY84 501 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 SLC35A3Q9Y2D2 325 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 MYH4Q9Y623 1939 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 H0YIV9 168 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 ZXDBP98169 803 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 IER5LQ5T953 404 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 NADSYN1Q6IA69 706 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 METTL27Q8N6F8 245 aaPredicted RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 OR5W2Q8NH69 310 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 TRMT10AQ8TBZ6 339 aaKnown RBP11.84□□□□□ -0.51
COL4A6-209ENST00000545689 PGAM5Q96HS1 289 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 GPR174Q9BXC1 333 aa11.84□□□□□ -0.51
COL4A6-209ENST00000545689 H7C417 338 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CERS1P27544 350 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CA5AP35218 305 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 TAP2Q03519 686 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 SEMA3BQ13214 749 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 C1orf189Q5VU69 101 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 DPY19L2P1Q6NXN4 242 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM239Q8WW34 195 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 C1QTNF2Q9BXJ5 285 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 SYT4Q9H2B2 425 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 GLS2Q9UI32 602 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 A8MV72 311 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 SOCS7O14512 581 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CDC123O75794 336 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 PTNP21246 168 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 DRD1P21728 446 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CRABP1P29762 137 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CDK3Q00526 305 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF791Q3KP31 576 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 PARS2Q7L3T8 475 aaKnown RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 IGFN1Q86VF2 1251 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM163Q8TC26 289 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 BADQ92934 168 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 MR1Q95460 341 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 MUL1Q969V5 352 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 KLHL15Q96M94 604 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF700Q9H0M5 742 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 TP63Q9H3D4 680 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 OR6C2Q9NZP2 312 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ANTXRLA6NF34 631 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 FMO6PO60774 539 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ALPLP05186 524 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 HTR2AP28223 471 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 AHRP35869 848 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 MLLT11Q13015 90 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 AIMP2Q13155 320 aaKnown RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 METTL4Q8N3J2 472 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 TMEM151AQ8N4L1 468 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 IQCF1Q8N6M8 205 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 COQ8AQ8NI60 647 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ACOT11Q8WXI4 607 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 PAQR5Q9NXK6 330 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ASIC5Q9NY37 505 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 PCDHGA8Q9Y5G5 932 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 KIR2DS5A0A0G2JLQ3 304 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 A0A0G2JNG1 304 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 KIR2DS3K7RE56 304 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 M0R3H8 397 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 VIPR2P41587 438 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 KIR2DS5Q14953 304 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 UAP1L1Q3KQV9 507 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CDNFQ49AH0 187 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 C12orf76Q8N812 135 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 OR4K13Q8NH42 304 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ZFP57Q9NU63 452 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 GJD2Q9UKL4 321 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 PPP1R3DO95685 299 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 C1SP09871 688 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ZNF888P0CJ79 500 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-209ENST00000545689 MC3RP41968 323 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 GNMTQ14749 295 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 OR9A2Q8NGT5 310 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 NINJ1Q92982 152 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 ACTR10Q9NZ32 417 aa11.83□□□□□ -0.52
COL4A6-209ENST00000545689 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 GJE1A6NN92 205 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ARAFP10398 606 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 EMX1Q04741 257 aaPredicted RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 SLC6A19Q695T7 634 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 C3P1Q6ZMU1 363 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PTRH1Q86Y79 214 aaKnown RBP11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ANKLE1Q8NAG6 615 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 RELTQ969Z4 430 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 BOLA2-SMG1P6H3BVE0 249 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 HSPA12AO43301 675 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 AMY2BP19961 511 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 TNFRSF1BP20333 461 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ALG10Q5BKT4 473 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 ARMCX6Q7L4S7 300 aa11.82□□□□□ -0.52
COL4A6-209ENST00000545689 PELI3Q8N2H9 469 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms