RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 GMPPAQ96IJ6 420 aaPredicted RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 UBXN10Q96LJ8 280 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 BTBD9Q96Q07 612 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 ATOH8Q96SQ7 321 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 NAP1L3Q99457 506 aaPredicted RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 LRRC1Q9BTT6 524 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 GRIP2Q9C0E4 1043 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 ALG2Q9H553 416 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 C12orf49Q9H741 205 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 CHODLQ9H9P2 273 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 LZTFL1Q9NQ48 299 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 CISD1Q9NZ45 108 aaKnown RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 NUDT4Q9NZJ9 180 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FLRT3Q9NZU0 649 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 PPP4R1LQ9P1A2 415 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 PRODH2Q9UF12 536 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 ASIC3Q9UHC3 531 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 PCNX3Q9H6A9 2034 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 SHISA9B4DS77 424 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 SUPT3HB4E1H0 165 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 H0YIV9 168 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 SUPT3HO75486 399 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 ERAL1O75616 437 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 PLGP00747 810 aaPredicted RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 MTHFD2P13995 350 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 ADH6P28332 368 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 EIF1AXP47813 144 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 FNTAP49354 379 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 RPS3AP61247 264 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 STX5Q13190 355 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 EFR3AQ14156 821 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 PPP1R7Q15435 360 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 CPSF6Q16630 551 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD4-212ENST00000545083 NRF1Q16656 503 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 TMEM44Q2T9K0 475 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 LIPJQ5W064 366 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 CLEC2AQ6UVW9 174 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 ISCA2Q86U28 154 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 MEX3DQ86XN8 651 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 PDIK1LQ8N165 341 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 GABRG1Q8N1C3 465 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 STEAP2Q8NFT2 490 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 PIWIL2Q8TC59 973 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 ADGRG7Q96K78 797 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 VSTM2LQ96N03 204 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 ZNF681Q96N22 645 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 HBEGFQ99075 208 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 CACNG6Q9BXT2 260 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 MRPL1Q9BYD6 325 aaKnown RBP8.36□□□□□ -1.07
CHD4-212ENST00000545083 PRRG4Q9BZD6 226 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 ADAM19Q9H013 955 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 FBXO34Q9NWN3 711 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 RNF11Q9Y3C5 154 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 PCDHA9Q9Y5H5 950 aa8.36□□□□□ -1.07
CHD4-212ENST00000545083 TRRAPQ9Y4A5 3859 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 GOLGA6L10A6NI86 522 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 CXorf49A8MYA2 514 aaPredicted RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 LINC01387J3KSC0 135 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 FOXE1O00358 373 aaPredicted RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 CXCL13O43927 109 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 FADS1O60427 444 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 SEMA3DO95025 777 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 OPN1LWP04000 364 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 SLC25A16P16260 332 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 CSNK2A2P19784 350 aaPredicted RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 IL12BP29460 328 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 AGTR1P30556 359 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 EVI2BP34910 448 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 PNLIPRP2P54317 469 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 DSCR9P59020 149 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 PHEXP78562 749 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 IRF9Q00978 393 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 GANABQ14697 944 aaKnown RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 ZKSCAN8Q15776 578 aaPredicted RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 ZNF628Q5EBL2 1059 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 CCNYL2Q5T2Q4 361 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 LGSNQ5TDP6 509 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 LIPNQ5VXI9 398 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 C11orf71Q6IPW1 123 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 GALNT10Q86SR1 603 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 FBXO36Q8NEA4 188 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 OR52B6Q8NGF0 335 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 OR10D3Q8NH80 312 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 UHMK1Q8TAS1 419 aaKnown RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 STAG3L4Q8TBR4 150 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 GRK7Q8WTQ7 553 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 LRRC39Q96DD0 335 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 C1GALT1C1Q96EU7 318 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 CNRIP1Q96F85 164 aaPredicted RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 NPAS1Q99742 590 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 EML4Q9HC35 981 aaKnown RBP8.35□□□□□ -1.07
CHD4-212ENST00000545083 SAYSD1Q9NPB0 183 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 FANCFQ9NPI8 374 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 AP4B1Q9Y6B7 739 aa8.35□□□□□ -1.07
CHD4-212ENST00000545083 DYSFO75923 2080 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 C1orf226A1L170 272 aa8.34□□□□□ -1.07
CHD4-212ENST00000545083 GMFGO60234 142 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms