RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 ZNF551Q7Z340 670 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 NUP43Q8NFH3 380 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 LILRB4Q8NHJ6 448 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 CLHC1Q8NHS4 586 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 RNF138Q8WVD3 245 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 HOXB13Q92826 284 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 ABTB1Q969K4 478 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 CIDECQ96AQ7 238 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 C3orf30Q96M34 536 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 PAIP2Q9BPZ3 127 aaKnown RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 TTYH2Q9BSA4 534 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 BHLHE41Q9C0J9 482 aaPredicted RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 SLC6A15Q9H2J7 730 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 GALNT9Q9HCQ5 603 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 FAM120CQ9NX05 1096 aaKnown RBP10.78□□□□□ -0.68
HDAC4-216ENST00000544989 GIN1Q9NXP7 522 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 CSMD2Q7Z408 3487 aa10.78□□□□□ -0.68
HDAC4-216ENST00000544989 A0A1W2PRB8 838 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 TMEM120BA0PK00 339 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 HSPB2A8KAH6 182 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 SLCO1B7G3V0H7 640 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ZNHIT1O43257 154 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ENDOUP21128 410 aaKnown RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 BGNP21810 368 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 COL8A1P27658 744 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 SRD5A2P31213 254 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 GABRA3P34903 492 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PTGDSP41222 190 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ZFP36L2P47974 494 aaKnown RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 TRPC1P48995 793 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PRIM2P49643 509 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 CRYZQ08257 329 aaKnown RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 GAB1Q13480 694 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 HSPB2Q16082 182 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PDCD2Q16342 344 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF385BQ569K4 471 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 RIPPLY2Q5TAB7 128 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF787Q6DD87 383 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ANKRD26P1Q6NSI1 321 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 SZRD1Q7Z422 152 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 CAMKMTQ7Z624 323 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ULK2Q8IYT8 1036 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 MARVELD2Q8N4S9 558 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ZNF781Q8N8C0 355 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 FAM83FQ8NEG4 500 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR4K17Q8NGC6 315 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR56A1Q8NGH5 318 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR10Q1Q8NGQ4 319 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR14L1PQ8NHC6 308 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PSMA8Q8TAA3 256 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 SFXN5Q8TD22 340 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 GPR151Q8TDV0 419 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR5P2Q8WZ92 322 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 EFHD2Q96C19 240 aaPredicted RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 COQ8BQ96D53 544 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 TIMP4Q99727 224 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 G6PC3Q9BUM1 346 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 C1orf50Q9BV19 199 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 OR2B2Q9GZK3 357 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PRDM14Q9GZV8 571 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 KCNJ16Q9NPI9 418 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 THAP1Q9NVV9 213 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 ALKBH4Q9NXW9 302 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PPP4R1LQ9P1A2 415 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 SPRR3Q9UBC9 169 aa10.77□□□□□ -0.69
HDAC4-216ENST00000544989 PHF3Q92576 2039 aaKnown RBP10.77□□□□□ -0.69
HDAC4-216ENST00000544989 TRPC5OSA6NMA1 111 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 LINC01387J3KSC0 135 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 ITM2AO43736 263 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 NKX2-2O95096 273 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 NGFRP08138 427 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 ALOX5P09917 674 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 GLI4P10075 376 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 CYP4B1P13584 511 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 MAP3K8P41279 467 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 CLNS1AP54105 237 aaKnown RBP10.76□□□□□ -0.69
HDAC4-216ENST00000544989 PRKAG1P54619 331 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 DSCR4P56555 118 aaPredicted RBP10.76□□□□□ -0.69
HDAC4-216ENST00000544989 CLDN8P56748 225 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 NUP107P57740 925 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 MAGOHP61326 146 aaKnown RBP10.76□□□□□ -0.69
HDAC4-216ENST00000544989 RCAN2Q14206 197 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 PTGR1Q14914 329 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 DPY19L1Q2PZI1 675 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 SLC25A35Q3KQZ1 300 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 HIST2H2BCQ6DN03 193 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 IFNEQ86WN2 208 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 LACC1Q8IV20 430 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 RIMKLAQ8IXN7 391 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 ANKRD42Q8N9B4 389 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 WDSUB1Q8N9V3 476 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 VPS37AQ8NEZ2 397 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 OR7A2PQ8NGA2 310 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 OR4N2Q8NGD1 307 aa10.76□□□□□ -0.69
HDAC4-216ENST00000544989 LRRC46Q96FV0 321 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms