RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 ZNF69Q9UC07 566 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 PLEKHB1Q9UF11 243 aaPredicted RBP12.09□□□□□ -0.47
PDZD4-209ENST00000544474 NDRG3Q9UGV2 375 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 SLC22A7Q9Y694 548 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 CDH10Q9Y6N8 788 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 TET1Q8NFU7 2136 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 H7C0S8 307 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 ZNF197O14709 1029 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 PRAMEF4O60810 478 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 ADRB1P08588 477 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 ERVK-25P63136 954 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 FGL1Q08830 312 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 PRAMEF9Q5VWM5 478 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 HTR3DQ70Z44 454 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 SLC16A13Q7RTY0 426 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 DNAJA3Q96EY1 480 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 EPYCQ99645 322 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 SMG9Q9H0W8 520 aaKnown RBP12.09□□□□□ -0.47
PDZD4-209ENST00000544474 ACER3Q9NUN7 267 aa12.09□□□□□ -0.47
PDZD4-209ENST00000544474 ATG2BQ96BY7 2078 aa12.08□□□□□ -0.47
PDZD4-209ENST00000544474 TRBV23-1A0A0A0MS06 115 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 A8MXK9 166 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PRMT3O60678 531 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 FMO6PO60774 539 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 OAZ2O95190 189 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 EPHX1P07099 455 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 C8orf89P0DMQ9 161 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 CBR1P16152 277 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 SHC1P29353 583 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 BMP8BP34820 402 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 STK19P49842 368 aaPredicted RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 CRYBA2P53672 197 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 STXBP1P61764 594 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 BTG1P62324 171 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PABPC1L2AQ5JQF8 200 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PLBD1Q6P4A8 553 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 GDPGP1Q6ZNW5 385 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 KRT78Q8N1N4 520 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 LRRC46Q96FV0 321 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 MNTQ99583 582 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 FUZQ9BT04 418 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 ABCG4Q9H172 646 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 OR10H1Q9Y4A9 318 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 A0A1W2PRB8 838 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 GPX2P18283 190 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 SMAD2Q15796 467 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RSPO2Q6UXX9 243 aaPredicted RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 GPR135Q8IZ08 494 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 MEIOBQ8N635 442 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RFT1Q96AA3 541 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 WBP1Q96G27 269 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 OR51J1Q9H342 316 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 BABAM2Q9NXR7 383 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RASD1Q9Y272 281 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PIKFYVEQ9Y2I7 2098 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 TNS1Q9HBL0 1735 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 TRABD2BA6NFA1 517 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 L7N2F9 121 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 HTR3BO95264 441 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RHCEP18577 417 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 ACADLP28330 430 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PTPN6P29350 595 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 MVDP53602 400 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 CLDN12P56749 244 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RGS7BPQ6MZT1 257 aaPredicted RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 SLC27A4Q6P1M0 643 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 NCEH1Q6PIU2 408 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 LINGO2Q7L985 606 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 PAQR7Q86WK9 346 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 TBC1D19Q8N5T2 526 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 MOSPD2Q8NHP6 518 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 IL17FQ96PD4 163 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 NKX3-1Q99801 234 aaPredicted RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 TREX2Q9BQ50 279 aaPredicted RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 TRMT61BQ9BVS5 477 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 IMP3Q9NV31 184 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 FAM120CQ9NX05 1096 aaKnown RBP12.08□□□□□ -0.48
PDZD4-209ENST00000544474 LRFN2Q9ULH4 789 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 DTX4Q9Y2E6 619 aa12.08□□□□□ -0.48
PDZD4-209ENST00000544474 BRCA1P38398 1863 aaKnown RBP12.07□□□□□ -0.48
PDZD4-209ENST00000544474 LOC100509620A0A075B734 347 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 MEIS3P1A6NDR6 274 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 ARHGEF33A8MVX0 844 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 RLN2P04090 185 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 GYPBP06028 91 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 LPLP06858 475 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 BPIP17213 487 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 CAPZA1P52907 286 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 PRMT2P55345 433 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 OPCMLQ14982 345 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 MLIPQ5VWP3 458 aa12.07□□□□□ -0.48
PDZD4-209ENST00000544474 C18orf63Q68DL7 685 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms