RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 C1orf189Q5VU69 101 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 SULT1C3Q6IMI6 304 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF614Q8N883 585 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 MLKLQ8NB16 471 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 COLGALT1Q8NBJ5 622 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF540Q8NDQ6 660 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 OR6F1Q8NGZ6 308 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 SSC4DQ8WTU2 575 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 CHPT1Q8WUD6 406 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 PCNPQ8WW12 178 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 CCDC51Q96ER9 411 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 DTNBP1Q96EV8 351 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 PALMDQ9NP74 551 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 THEGQ9P2T0 379 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ERRFI1Q9UJM3 462 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF346Q9UL40 294 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 EXOGQ9Y2C4 368 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 PARP14Q460N5 1801 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 RFX7Q2KHR2 1363 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 MYH1P12882 1939 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 MYO3BQ8WXR4 1341 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 A0A087WZY1 265 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 K7ERI5 159 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 FBP2O00757 339 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 NOL3O60936 208 aaKnown RBP3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ADORA3P0DMS8 318 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 RRASP10301 218 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 TSPAN8P19075 237 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 NDST1P52848 882 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ERVK-16P61578 105 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 HSF2Q03933 536 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ADPRMQ3LIE5 342 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 MOGAT2Q3SYC2 334 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 UNC50Q53HI1 259 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 DPY19L2P2Q6ZN68 376 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 GDPGP1Q6ZNW5 385 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ARMCX2Q7L311 632 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF329Q86UD4 541 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 MISPQ8IVT2 679 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 METTL4Q8N3J2 472 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 BANPQ8N9N5 519 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ZNRF1Q8ND25 227 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ICA1LQ8NDH6 482 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF248Q8NDW4 579 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 IPMKQ8NFU5 416 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 OR1K1Q8NGR3 316 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 U2AF1L4Q8WU68 220 aaKnown RBP3.09□□□□□ -1.91
SCFD1-207ENST00000544052 C11orf52Q96A22 123 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 RCHY1Q96PM5 261 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 DEFB129Q9H1M3 183 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 GDAP2Q9NXN4 497 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 ATXN10Q9UBB4 475 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 TBK1Q9UHD2 729 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 BCAP29Q9UHQ4 241 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 FOXJ3Q9UPW0 622 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 RNF115Q9Y4L5 304 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 U3KQV3 271 aa3.09□□□□□ -1.91
SCFD1-207ENST00000544052 CEP290O15078 2479 aa3.09□□□□□ -1.92
SCFD1-207ENST00000544052 MYH7P12883 1935 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 LOC105371242A0A075B767 164 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 IQCMA0A1B0GVH7 501 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 IGLON5A6NGN9 336 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ANKRD30BLA7E2S9 258 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 PDXKO00764 312 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CPLX1O14810 134 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 OAS1P00973 400 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 KRT13P13646 458 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 RPL9P32969 192 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NUMBP49757 651 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 SGSHP51688 502 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CRIP2P52943 208 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 FKBP1AP62942 108 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ELP6Q0PNE2 266 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NFATC2Q13469 925 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 UPP1Q16831 310 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 LRIT3Q3SXY7 679 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 USH1GQ495M9 461 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ARSKQ6UWY0 536 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CWC27Q6UX04 472 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GPR142Q7Z601 462 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF573Q86YE8 665 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 CCDC71Q8IV32 467 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 RAB3CQ96E17 227 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 AGAP4Q96P64 663 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 RBM4Q9BWF3 364 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 UPF3AQ9H1J1 476 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 LIME1Q9H400 295 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 TDRD3Q9H7E2 651 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NT5DC2Q9H857 520 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NMUR1Q9HB89 426 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 NRN1Q9NPD7 142 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 GTSE1Q9NYZ3 720 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 TMOD2Q9NZR1 351 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 EIF3KQ9UBQ5 218 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 ASIC3Q9UHC3 531 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.08□□□□□ -1.92
SCFD1-207ENST00000544052 MYH8P13535 1937 aa3.08□□□□□ -1.92
SCFD1-207ENST00000544052 RLFQ13129 1914 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms