RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 FLRT3Q9NZU0 649 aa13.84□□□□□ -0.19
CD9-210ENST00000543916 ZNF462Q96JM2 2506 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 ANKRD33BA6NCL7 494 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 PRAMEF25A6NGN4 478 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 ICOSLGO75144 302 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 CRYABP02511 175 aaKnown RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 KRT16P08779 473 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 TRPC1P48995 793 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 TDGF1P3P51864 188 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 KCNJ2P63252 427 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 RPP38P78345 283 aaKnown RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 POU6F2P78424 691 aaPredicted RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 PAGE3Q5JUK9 113 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 TMEM81Q6P7N7 255 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 TRIML2Q8N7C3 387 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 POGLUT1Q8NBL1 392 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 PNPT1Q8TCS8 783 aaKnown RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 MIPOL1Q8TD10 442 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 ZFP90Q8TF47 636 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 RNF138Q8WVD3 245 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 NR4A3Q92570 626 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 SLX1AQ9BQ83 275 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 DOHHQ9BU89 302 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 BTBD2Q9BX70 525 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 NMUR2Q9GZQ4 415 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 NSRP1Q9H0G5 558 aaKnown RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 TSPAN10Q9H1Z9 355 aaPredicted RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 OR51I1Q9H343 314 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 METTL7AQ9H8H3 244 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 GALNT9Q9HCQ5 603 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 AGPAT4Q9NRZ5 378 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 OLAHQ9NV23 265 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 FBXO34Q9NWN3 711 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 HRH3Q9Y5N1 445 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.83□□□□□ -0.2
CD9-210ENST00000543916 SPTA1P02549 2419 aa13.83□□□□□ -0.2
CD9-210ENST00000543916 A0A096LPI6 279 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 A0A1W2PP18 115 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 C2orf72A6NCS6 295 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 LRRC3CA6NJW4 275 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 FAM166BA8MTA8 275 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 PYCARD-AS1I3L0S3 204 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 ADAM10O14672 748 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 SNX3O60493 162 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 TRIM3O75382 744 aaPredicted RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 GLSO94925 669 aaPredicted RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 ANP32DO95626 131 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 PLA2G2AP14555 144 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 ZNF24P17028 368 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 FOXK1P85037 733 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 ALDH6A1Q02252 535 aaKnown RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 PLGLB1Q02325 96 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 KLF10Q13118 480 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 TBCELQ5QJ74 424 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 COX20Q5RI15 118 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 DCST2Q5T1A1 773 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 TNFAIP8L2Q6P589 184 aaPredicted RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 ANGPTL8Q6UXH0 198 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 CPLX4Q7Z7G2 160 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 RNF130Q86XS8 419 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 SIAH3Q8IW03 269 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 MSRB3Q8IXL7 192 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 TMCO6Q96DC7 493 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 AURKBQ96GD4 344 aaPredicted RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 OSBPL11Q9BXB4 747 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 TTTY12Q9BZ98 90 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 KLRF1Q9NZS2 232 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 SLAMF8Q9P0V8 285 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 MRTO4Q9UKD2 239 aaKnown RBP13.82□□□□□ -0.2
CD9-210ENST00000543916 PCDHB14Q9Y5E9 798 aa13.82□□□□□ -0.2
CD9-210ENST00000543916 C17orf51A8MQB3 221 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 FADS1O60427 444 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 UTS2O95399 124 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 OR12D1P0DN82 309 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 KHKP50053 298 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 MVDP53602 400 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 GAS1P54826 345 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 PSMD4P55036 377 aaKnown RBP13.81□□□□□ -0.2
CD9-210ENST00000543916 SNTA1Q13424 505 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.81□□□□□ -0.2
CD9-210ENST00000543916 GRAMD1BQ3KR37 738 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 LRIF1Q5T3J3 769 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 FNDC7Q5VTL7 733 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 RAB8BQ92930 207 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 ZNF597Q96LX8 424 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 RTN4RQ9BZR6 473 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 IL1RL2Q9HB29 575 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 ZFP64Q9NPA5 681 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 ARMCX1Q9P291 453 aa13.81□□□□□ -0.2
CD9-210ENST00000543916 TRBV5-3A0A0A0MS03 114 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 DUXAA6NLW8 204 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 NPIPA5E9PKD4 350 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 HMGN4O00479 90 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 TFECO14948 347 aaPredicted RBP13.8□□□□□ -0.2
CD9-210ENST00000543916 ASNA1O43681 348 aa13.8□□□□□ -0.2
CD9-210ENST00000543916 SCO2O43819 266 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms