RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 FOLH1BQ9HBA9 442 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SLC22A11Q9NSA0 550 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ACER3Q9NUN7 267 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SIDT1Q9NXL6 827 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 CTSFQ9UBX1 484 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 TMEFF2Q9UIK5 374 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 C3orf18Q9UK00 162 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 MKL2Q9ULH7 1088 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 DTX4Q9Y2E6 619 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 PCDHGB2Q9Y5G2 931 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 HEMK1Q9Y5R4 338 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 EFCAB7A8K855 629 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 MITFO75030 526 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 NKX2-2O95096 273 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 IGFBP5P24593 272 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ACP1P24666 158 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 POLR2IP36954 125 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 FOXL2P58012 376 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 POU6F2P78424 691 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 ADARB1P78563 741 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 ZFP36L1Q07352 338 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 FUT7Q11130 342 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 EXOC3L2Q2M3D2 409 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 TMEM151BQ8IW70 566 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 PEX5LQ8IYB4 626 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 OFCC1Q8IZS5 231 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 OR4N2Q8NGD1 307 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 OR6T1Q8NGN1 323 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 C16orf52Q8NHV5 167 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SENP5Q96HI0 755 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 VSTM2LQ96N03 204 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ZNF578Q96N58 590 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 PELOQ9BRX2 385 aaKnown RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 ZNF350Q9GZX5 532 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 GABARAPL1Q9H0R8 117 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 MKKSQ9NPJ1 570 aaPredicted RBP10.24□□□□□ -0.77
SCG3-202ENST00000542355 RXFP3Q9NSD7 469 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 RLIMQ9NVW2 624 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 KIF17Q9P2E2 1029 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SLC13A4Q9UKG4 626 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 SLC9A8Q9Y2E8 581 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 ORC6Q9Y5N6 252 aa10.24□□□□□ -0.77
SCG3-202ENST00000542355 IGKV3D-11A0A0A0MRZ8 115 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CLDN24A6NM45 220 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 H0YAE9 185 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CDX4O14627 284 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 PCDH17O14917 1159 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 PRAMEF2O60811 474 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 SEC24DO94855 1032 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 KCNK2O95069 426 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 IL7RP16871 459 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 GALNSP34059 522 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 RAD23AP54725 363 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 RHAGQ02094 409 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 PIN1Q13526 163 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 MICAQ29983 383 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CCDC157Q569K6 752 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 LAIR1Q6GTX8 287 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 COX15Q7KZN9 410 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CLIP4Q8N3C7 705 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 FAM169BQ8N8A8 192 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 ZNF615Q8N8J6 731 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 OR4C15Q8NGM1 316 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 GIPC3Q8TF64 312 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 HOXB13Q92826 284 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 RMND5BQ96G75 393 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 RDH12Q96NR8 316 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 MBOAT4Q96T53 435 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 FEVQ99581 238 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 VN1R1Q9GZP7 353 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 TRIM45Q9H8W5 580 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 NMNAT1Q9HAN9 279 aaPredicted RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 CACYBPQ9HB71 228 aaKnown RBP10.23□□□□□ -0.77
SCG3-202ENST00000542355 FAM118AQ9NWS6 357 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 ZNF232Q9UNY5 417 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 SATB2Q9UPW6 733 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 IFT52Q9Y366 437 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CHST2Q9Y4C5 530 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 CLCA3PQ9Y6N3 262 aa10.23□□□□□ -0.77
SCG3-202ENST00000542355 NPIPA5A0A0B4J1W7 369 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 CENPVL1A0A0U1RR11 272 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 NPIPA7E9PJI5 369 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 POLR1CO15160 346 aaPredicted RBP10.22□□□□□ -0.77
SCG3-202ENST00000542355 FRS3O43559 492 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 DYRK3O43781 588 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 PIP5K1CO60331 668 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 GP1BAP07359 652 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 NPIPA8P0DM63 369 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 MYF6P23409 242 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 PRKAR1BP31321 381 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 PIGAP37287 484 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 HMGA2P52926 109 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 MYBPC1Q00872 1141 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 OCA2Q04671 838 aa10.22□□□□□ -0.77
SCG3-202ENST00000542355 EPS8Q12929 822 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms