RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RANBP3LQ86VV4 465 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ADHFE1Q8IWW8 467 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CFAP206Q8IYR0 622 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CMTR2Q8IYT2 770 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OFCC1Q8IZS5 231 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PRSS35Q8N3Z0 413 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ACBD7Q8N6N7 88 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF610Q8N9Z0 462 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 L3MBTL4Q8NA19 623 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 POGLUT1Q8NBL1 392 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 AQP11Q8NBQ7 271 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PLA2G15Q8NCC3 412 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR4F6Q8NGB9 312 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR5T3Q8NGG3 340 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR56A4Q8NGH8 313 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR52N4Q8NGI2 321 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR9A2Q8NGT5 310 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR51A7Q8NH64 312 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR10A6Q8NH74 314 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR2V1Q8NHB1 315 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 THAP6Q8TBB0 222 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF564Q8TBZ8 553 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TMEM163Q8TC26 289 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CPT1CQ8TCG5 803 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 BRI3BPQ8WY22 251 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TM4SF18Q96CE8 201 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 FOXRED1Q96CU9 486 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MRPL38Q96DV4 380 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SPACA9Q96E40 222 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 LINGO1Q96FE5 620 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ZNF514Q96K75 400 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MSLNLQ96KJ4 702 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OR1F2PQ96R84 312 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SMAD5Q99717 465 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MAP3K3Q99759 626 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CPNE1Q99829 537 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 EBNA1BP2Q99848 306 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PRRT1Q99946 306 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CMSS1Q9BQ75 279 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ACBD6Q9BR61 282 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SPXQ9BT56 116 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 WRAP53Q9BUR4 548 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SEC11CQ9BY50 192 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MRPL13Q9BYD1 178 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SLC29A3Q9BZD2 475 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 DPH1Q9BZG8 443 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 THAP2Q9H0W7 228 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 C11orf54Q9H0W9 315 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 NXF3Q9H4D5 531 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 MRPL47Q9HD33 250 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ABCB9Q9NP78 766 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 TNFRSF12AQ9NP84 129 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 SLC22A11Q9NSA0 550 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 NRBP2Q9NSY0 501 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GAR1Q9NY12 217 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 VNN3Q9NY84 501 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PDP1Q9P0J1 537 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 FBXL2Q9UKC9 423 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GJD2Q9UKL4 321 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OGDHLQ9ULD0 1010 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 NDRG4Q9ULP0 352 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 AURKCQ9UQB9 309 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 CMAHPQ9Y471 501 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 ATG4BQ9Y4P1 393 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 GPR45Q9Y5Y3 372 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 OAS3Q9Y6K5 1087 aaKnown RBP4.09□□□□□ -1.75
SNHG1-219ENST00000542112 PLIN4Q96Q06 1357 aa4.09□□□□□ -1.75
SNHG1-219ENST00000542112 COL4A1P02462 1669 aa4.09□□□□□ -1.76
SNHG1-219ENST00000542112 TIAM2Q8IVF5 1701 aa4.09□□□□□ -1.76
SNHG1-219ENST00000542112 DOCK2Q92608 1830 aa4.09□□□□□ -1.76
SNHG1-219ENST00000542112 ANKRD31Q8N7Z5 1873 aa4.09□□□□□ -1.76
SNHG1-219ENST00000542112 TANC1Q9C0D5 1861 aa4.09□□□□□ -1.76
SNHG1-219ENST00000542112 MYH9P35579 1960 aaKnown RBP4.09□□□□□ -1.76
SNHG1-219ENST00000542112 LOC100130705A0A1B0GUX0 176 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 SERTM2A0A1B0GWG4 89 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 A0A1W2PP18 115 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 TCRBV9S1A1TA0A576 114 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 TCRBV21S2A2A0A5A6 115 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 SLC5A10A0PJK1 596 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
SNHG1-219ENST00000542112 PI4KAP2A4QPH2 592 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 PRORSD1PA6NEY8 169 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 FABP12A6NFH5 140 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 CLCA1A8K7I4 914 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 CDRT15L2A8MXV6 281 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 BHLHE40O14503 412 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 TP53I11O14683 189 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 CHADO15335 359 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 MBTPS2O43462 519 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 GMFGO60234 142 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 NRP2O60462 931 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 TLR5O60602 858 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 PRAMEF2O60811 474 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 KHDRBS3O75525 346 aaKnown RBP4.08□□□□□ -1.76
SNHG1-219ENST00000542112 WBP4O75554 376 aaKnown RBP4.08□□□□□ -1.76
SNHG1-219ENST00000542112 KAT7O95251 611 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 MPC2O95563 127 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 NTSR2O95665 410 aa4.08□□□□□ -1.76
SNHG1-219ENST00000542112 AP2A1O95782 977 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms