RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SLC1A6P48664 564 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SULT1E1P49888 294 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 BACE1P56817 501 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 RPS8P62241 208 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SNRPD1P62314 119 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 RPS4XP62701 263 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 DHODHQ02127 395 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 GUCY2DQ02846 1103 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 MFGE8Q08431 387 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 BNIP1Q12981 228 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 GPM6BQ13491 265 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 ZMYND11Q15326 602 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TAB1Q15750 504 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TATDN3Q17R31 274 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FILIP1LQ4L180 1135 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TCHHL1Q5QJ38 904 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM72AQ5TYM5 149 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 NCR3LG1Q68D85 454 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM72DQ6L9T8 149 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 STEAP1BQ6NZ63 245 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 WASH2PQ6VEQ5 465 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 LPCAT2Q7L5N7 544 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 VASH2Q86V25 355 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM72BQ86X60 149 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 LACC1Q8IV20 430 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 DND1Q8IYX4 353 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SLC22A15Q8IZD6 547 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 CIARTQ8N365 385 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF397Q8NF99 534 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 OR9Q2Q8NGE9 314 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 OR5AP2Q8NGF4 316 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 OR5M9Q8NGP3 310 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FBXO25Q8TCJ0 367 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PNPT1Q8TCS8 783 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 RAET1EQ8TD07 263 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SLC5A11Q8WWX8 675 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FBXO17Q96EF6 278 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 CFAP53Q96M91 514 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 FAM210AQ96ND0 272 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 ZNF607Q96SK3 696 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TBCDQ9BTW9 1192 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 DGCR6LQ9BY27 220 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PRO3102Q9H379 93 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 KAT8Q9H7Z6 458 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 MTHFD2LQ9H903 347 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SP140LQ9H930 580 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 PANK3Q9H999 370 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 NLGN3Q9NZ94 848 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 KLK11Q9UBX7 282 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 MIOXQ9UGB7 285 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TRMT112Q9UI30 125 aaKnown RBP3.64□□□□□ -1.83
SNHG1-217ENST00000541578 TCF19Q9Y242 345 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 RNF215Q9Y6U7 377 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 SF3B1O75533 1304 aaKnown RBP eCLIP3.64□□□□□ -1.832e-7■■■■■ 35.3
SNHG1-217ENST00000541578 SH3TC1Q8TE82 1336 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 KIF26BQ2KJY2 2108 aa3.64□□□□□ -1.83
SNHG1-217ENST00000541578 LAMB1P07942 1786 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 COL1A1P02452 1464 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 A0A0J9YVX5 310 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 SH3PXD2BA1X283 911 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CYSRT1A8MQ03 144 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 VGLL3A8MV65 326 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 NEDD8-MDP1E9PL57 170 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 LMO7DNF2Z398 122 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 XPO1O14980 1071 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CSDE1O75534 798 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CGAP01215 116 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 IGHEP01854 428 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 FCER2P06734 321 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CLUP10909 449 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 UQCRBP14927 111 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 NDST1P52848 882 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PEX3P56589 373 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PPIAP62937 165 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 IL24Q13007 206 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CHIT1Q13231 466 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 EXOSC2Q13868 293 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CCDC6Q16204 474 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CCDC152Q4G0S7 254 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 BOLA3Q53S33 107 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 FFAR4Q5NUL3 377 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 BEND6Q5SZJ8 279 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CEP85LQ5SZL2 805 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ADAM5Q6NVV9 412 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 NIPAL3Q6P499 406 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CES3Q6UWW8 571 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PTAR1Q7Z6K3 402 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 RANBP3LQ86VV4 465 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 TBC1D10CQ8IV04 446 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 WDR49Q8IV35 697 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 CCDC36Q8IYA8 594 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 GVQW1Q8N7I0 195 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 ADAD2Q8NCV1 583 aaKnown RBP3.63□□□□□ -1.83
SNHG1-217ENST00000541578 OR52M1Q8NGK5 317 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 GATAD1Q8WUU5 269 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 LIPHQ8WWY8 451 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 RLN3Q8WXF3 142 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 MCHR2Q969V1 340 aa3.63□□□□□ -1.83
SNHG1-217ENST00000541578 PNPLA2Q96AD5 504 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms