RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SLCO6A1Q86UG4 719 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 SLC22A16Q86VW1 577 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 ZDHHC21Q8IVQ6 265 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 SLC16A11Q8NCK7 471 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 SLC9A6Q92581 669 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 TMBIM1Q969X1 311 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 C7orf34Q96L11 122 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 NECTIN3Q9NQS3 549 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 SEMA4GQ9NTN9 838 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 DNAJB9Q9UBS3 223 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 CNOT11Q9UKZ1 510 aaKnown RBP8.09□□□□□ -1.11
THBS3-210ENST00000541576 ERGIC3Q9Y282 383 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 CCDC88CQ9P219 2028 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 PRAMEF25A6NGN4 478 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 DLGAP1O14490 977 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 AGR2O95994 175 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 IFNA16P05015 189 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 PDX1P52945 283 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 FUT5Q11128 374 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 TCF15Q12870 199 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 MOGQ16653 247 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 TMEM179BQ7Z7N9 219 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 BPHLQ86WA6 291 aaPredicted RBP8.09□□□□□ -1.11
THBS3-210ENST00000541576 TFAP2CQ92754 450 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 DMRTB1Q96MA1 342 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 ZNF607Q96SK3 696 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 PELOQ9BRX2 385 aaKnown RBP8.09□□□□□ -1.11
THBS3-210ENST00000541576 APMAPQ9HDC9 416 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 MKKSQ9NPJ1 570 aaPredicted RBP8.09□□□□□ -1.11
THBS3-210ENST00000541576 VNN3Q9NY84 501 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 ZNF639Q9UID6 485 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 LIPT1Q9Y234 373 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 HCN4Q9Y3Q4 1203 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 NINQ8N4C6 2090 aa8.09□□□□□ -1.11
THBS3-210ENST00000541576 TAF4O00268 1085 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 GNGT2O14610 69 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CBX7O95931 251 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 FABP3P05413 133 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 HBQ1P09105 142 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 TGFBR1P36897 503 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 COPZ1P61923 177 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 IL11RAQ14626 422 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 DUSP7Q16829 419 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 GPAT3Q53EU6 434 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CCDC157Q569K6 752 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 VWA2Q5GFL6 755 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 QSOX2Q6ZRP7 698 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 C16orf62Q7Z3J2 963 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 KRT73Q86Y46 540 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 HS3ST5Q8IZT8 346 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CDRT4Q8N9R6 151 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 SLC38A9Q8NBW4 561 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 OR52R1Q8NGF1 315 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 BBS10Q8TAM1 723 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 SPPL2AQ8TCT8 520 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 SLC35A4Q96G79 324 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 LHPPQ9H008 270 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 BCL2L10Q9HD36 194 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 BAG5Q9UL15 447 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 RIF1Q5UIP0 2472 aaKnown RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 KNTC1P50748 2209 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 M0R3G1 203 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 POLR1CO15160 346 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 ALBP02768 609 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CHRM4P08173 479 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 FGF5P12034 268 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 TNNI3P19429 210 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 OR1E2P47887 323 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 INAQ16352 499 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 IFI44LQ53G44 452 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 PRAMEF8Q5VWM4 474 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 PRAMEF7Q5VXH5 474 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ZCCHC12Q6PEW1 402 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ADCK1Q86TW2 530 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 STK32CQ86UX6 486 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ARMC8Q8IUR7 673 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 PRSS58Q8IYP2 241 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CDS1Q92903 461 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 COL21A1Q96P44 957 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 C9orf16Q9BUW7 83 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CALML5Q9NZT1 146 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 NCDNQ9UBB6 729 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 C4orf47A7E2U8 309 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 CLPXO76031 633 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 RASAL1O95294 804 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 NADKO95544 446 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 RECKO95980 971 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ALOX5P09917 674 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ACP2P11117 423 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 S1PR1P21453 382 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 GALNSP34059 522 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 ZNF155Q12901 538 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 ZNF267Q14586 743 aaPredicted RBP8.08□□□□□ -1.12
THBS3-210ENST00000541576 CSRP2Q16527 193 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 DUSP5Q16690 384 aa8.08□□□□□ -1.12
THBS3-210ENST00000541576 KIF26BQ2KJY2 2108 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms