RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 HEPHL1Q6MZM0 1159 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 FIGNL1Q6PIW4 674 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 CCDC81Q6ZN84 652 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 C16orf62Q7Z3J2 963 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 HMGN2P46Q86SG4 172 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 ZAR1Q86SH2 424 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 ULK2Q8IYT8 1036 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 MICU2Q8IYU8 434 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 FBXW8Q8N3Y1 598 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 BCORP1Q8N888 145 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 COX18Q8N8Q8 333 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 KDF1Q8NAX2 398 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 OR2T12Q8NG77 320 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 OR5L2Q8NGL0 311 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 NUBPLQ8TB37 319 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 SLC38A5Q8WUX1 472 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 THAP4Q8WY91 577 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 TMBIM1Q969X1 311 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 TP53INP1Q96A56 240 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 MCUR1Q96AQ8 359 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 RMND5BQ96G75 393 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 TMEM19Q96HH6 336 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 REXO5Q96IC2 774 aaKnown RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 FER1L6-AS2Q96M78 137 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 SDF2Q99470 211 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 KCTD14Q9BQ13 255 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 BTBD2Q9BX70 525 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 TMEM38AQ9H6F2 299 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 RUBCNLQ9H714 662 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 A4GALTQ9NPC4 353 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 GIN1Q9NXP7 522 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 MYOTQ9UBF9 498 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 EGFL7Q9UHF1 273 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 CBLCQ9ULV8 474 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 POLHQ9Y253 713 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 OR10H1Q9Y4A9 318 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 CFAP47Q6ZTR5 3102 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 NPIPA5A0A0B4J1W7 369 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ELOVL7A1L3X0 281 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 DUXAA6NLW8 204 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 NPIPA7E9PJI5 369 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 TO15178 435 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 ITGA10O75578 1167 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 OR2J2O76002 312 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 H6PDO95479 791 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 BCHEP06276 602 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 NPIPA8P0DM63 369 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 NR2F1P10589 423 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ME2P23368 584 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 HTR1EP28566 365 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 AQP1P29972 269 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 PIGAP37287 484 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 MAGEA8P43361 318 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 MLF1P58340 268 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 CDK6Q00534 326 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 CHRNEQ04844 493 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ZNF630Q2M218 657 aaPredicted RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 ARHGAP11BQ3KRB8 267 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 GPAT3Q53EU6 434 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 DCST2Q5T1A1 773 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ATAD3BQ5T9A4 648 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 PROSER1Q86XN7 944 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 GALNT16Q8N428 558 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 TMEM102Q8N9M5 508 aaPredicted RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 CLEC1AQ8NC01 280 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 CHDHQ8NE62 594 aaPredicted RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 C17orf47Q8NEP4 570 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 FAM110BQ8TC76 370 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ZCCHC14Q8WYQ9 949 aaKnown RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 EFHD2Q96C19 240 aaPredicted RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 CCDC124Q96CT7 223 aaKnown RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 ZG16BQ96DA0 208 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 HSPBAP1Q96EW2 488 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 RSPO3Q9BXY4 272 aaPredicted RBP8.61□□□□□ -1.03
DDX55-208ENST00000541259 LHPPQ9H008 270 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 ING2Q9H160 280 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 Q9N2J8 555 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 EXD2Q9NVH0 621 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 FLRT3Q9NZU0 649 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 P2RX2Q9UBL9 471 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 SLC7A8Q9UHI5 535 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 MKLN1Q9UL63 735 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 AP3M1Q9Y2T2 418 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 NPFFR2Q9Y5X5 522 aa8.61□□□□□ -1.03
DDX55-208ENST00000541259 CACNA1GO43497 2377 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TPRP12270 2363 aaKnown RBP8.6□□□□□ -1.03
DDX55-208ENST00000541259 TTC36A6NLP5 189 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 C5orf58C9J3I9 102 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 CXCR6O00574 342 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 GSTA4O15217 222 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 ACOX3O15254 700 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 TSPAN2O60636 221 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 REM1O75628 298 aa8.6□□□□□ -1.03
DDX55-208ENST00000541259 AGR2O95994 175 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms