RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 OR11H7Q8NGC8 314 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 DTD2Q96FN9 168 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 LRRC3BQ96PB8 259 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 HINT3Q9NQE9 182 aaKnown RBP9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 KLHL1Q9NR64 748 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 EVA1BQ9NVM1 165 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 FBXL4Q9UKA2 621 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 GSTK1Q9Y2Q3 226 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 KIAA1549LQ6ZVL6 1849 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 NDUFS4O43181 175 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 C1QBP02746 253 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 GYPBP06028 91 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 CCR6P51684 374 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 HCCSP53701 268 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 PPP3R1P63098 170 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SP3Q02447 781 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC25A35Q3KQZ1 300 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 KLHL12Q53G59 568 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 C1orf94Q6P1W5 598 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLBD1Q6P4A8 553 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ARL9Q6T311 187 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 DPPA4Q7L190 304 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR8H3Q8N146 312 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 FAM109AQ8N4B1 249 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 LINC01555Q8NAE3 123 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ARRDC3Q96B67 414 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDR34Q96EX3 536 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 CNRIP1Q96F85 164 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SAMD8Q96LT4 415 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 COQ7Q99807 217 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 C19orf43Q9BQ61 176 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF649Q9BS31 505 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 OSGEPL1Q9H4B0 414 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SPHK2Q9NRA0 654 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 PTGFRNQ9P2B2 879 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF624Q9P2J8 865 aaPredicted RBP9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ICKQ9UPZ9 632 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ATG4BQ9Y4P1 393 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 CDH10Q9Y6N8 788 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 KIAA0100Q14667 2235 aaKnown RBP9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 NPIPA5A0A0B4J1W7 369 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 PRR23AA6NEV1 266 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 LEUTXA8MZ59 168 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 NPIPA7E9PJI5 369 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ARHGEF9O43307 516 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 NPIPA8P0DM63 369 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 HLA-DMAP28067 261 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ACVR1BP36896 505 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 MC3RP41968 323 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 E2F1Q01094 437 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC3A1Q07837 685 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 KLHL22Q53GT1 634 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 CCNJQ5T5M9 372 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 RFLNBQ8N5W9 214 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 NATD1Q8N6N6 113 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR4D9Q8NGE8 314 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 HMGB4Q8WW32 186 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 PIGKQ92643 395 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 COL26A1Q96A83 441 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 TIFAQ96CG3 184 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 VWCEQ96DN2 955 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 BBS4Q96RK4 519 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ABHD1Q96SE0 405 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SOSTQ9BQB4 213 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ABCG5Q9H222 651 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 IMP3Q9NV31 184 aaKnown RBP9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 ING3Q9NXR8 418 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 LIPT1Q9Y234 373 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 RASD1Q9Y272 281 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 SLC9A8Q9Y2E8 581 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 AP1M2Q9Y6Q5 423 aa9.71□□□□□ -0.86
CDC42SE1-207ENST00000540998 TEX46H3BTG2 121 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 SEC14L5O43304 696 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 NOS1APO75052 506 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 SRPRAP08240 638 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRAPPC2P0DI81 140 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TRAPPC2BP0DI82 140 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 RPL3P39023 403 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 RAB40BQ12829 278 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MRPL28Q13084 256 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 AGERQ15109 404 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZNF311Q5JNZ3 666 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TOR2AQ5JU69 321 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 SPRED2Q7Z698 418 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 METTL3Q86U44 580 aaKnown RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 OR9A2Q8NGT5 310 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 POF1BQ8WVV4 589 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 AP3S1Q92572 193 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 NUS1Q96E22 293 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 ZFP3Q96NJ6 502 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEM245Q9H330 911 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 NKIRAS2Q9NYR9 191 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 PLEKHM1Q9Y4G2 1056 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 WDR87Q6ZQQ6 2873 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 IGKV1-8A0A0C4DH67 115 aa9.7□□□□□ -0.86
CDC42SE1-207ENST00000540998 TMEM129A0AVI4 362 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms