RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 EFR3AQ14156 821 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 SLMAPQ14BN4 828 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 ACAP2Q15057 778 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.56□□□□□ -1.36
YBX3-209ENST00000540747 TECRLQ5HYJ1 363 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 CCNYL2Q5T2Q4 361 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 C6orf163Q5TEZ5 329 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 FAM219BQ5XKK7 198 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 OR5M10Q6IEU7 315 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 ADAM5Q6NVV9 412 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 STAC2Q6ZMT1 411 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 C3orf62Q6ZUJ4 267 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 FAM214BQ7L5A3 538 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PAGE2Q7Z2X7 111 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 CCDC91Q7Z6B0 441 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 MILR1Q7Z6M3 343 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 TBC1D1Q86TI0 1168 aaPredicted RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 GGNQ86UU5 652 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 LILRB1Q8NHL6 650 aaPredicted RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 TMCO6Q96DC7 493 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 CDK15Q96Q40 435 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 ADOQ96SZ5 270 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 RTN4RQ9BZR6 473 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 BRINP2Q9C0B6 783 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 FAM107BQ9H098 131 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 NOL11Q9H8H0 719 aaKnown RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 ANKRA2Q9H9E1 313 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PLSCR4Q9NRQ2 329 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 WHRNQ9P202 907 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 TXNDC16Q9P2K2 825 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PRODH2Q9UF12 536 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 BCAP29Q9UHQ4 241 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 DKKL1Q9UK85 242 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 PCTPQ9UKL6 214 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 ZNF337Q9Y3M9 751 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 ANGPTL3Q9Y5C1 460 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 TNPO3Q9Y5L0 923 aaKnown RBP6.56□□□□□ -1.36
YBX3-209ENST00000540747 PLCE1Q9P212 2302 aa6.56□□□□□ -1.36
YBX3-209ENST00000540747 A0A087X1B8 175 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 A0A096LNT2 108 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 IGLV3-32A0A0A0MS00 114 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 OR2M5A3KFT3 312 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 RNF212BA8MTL3 300 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 LINC01387J3KSC0 135 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 RAD51CO43502 376 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 CD5LO43866 347 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PLOD3O60568 738 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ERAL1O75616 437 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 REM1O75628 298 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 KLHL2O95198 593 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PSMG1O95456 288 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ALDOAP04075 364 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 RPS17P08708 135 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 DANCRP0C864 163 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 GFAPP14136 432 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 IL11P20809 199 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 EVI2BP34910 448 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 MAGEA12P43365 314 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 SLC6A8P48029 635 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PNLIPRP2P54317 469 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 NR1H2P55055 460 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ATP5J2P56134 94 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 TRA2BP62995 288 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 PSG6Q00889 435 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ZNF844Q08AG5 666 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 GANABQ14697 944 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 PON3Q15166 354 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ETFDHQ16134 617 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 FAM83EQ2M2I3 478 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 LRIG3Q6UXM1 1119 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 RAPH1Q70E73 1250 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
YBX3-209ENST00000540747 P4HA3Q7Z4N8 544 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 HIPK1Q86Z02 1210 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 MREGQ8N565 214 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ARFGAP2Q8N6H7 521 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PTGR2Q8N8N7 351 aaPredicted RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 OR4N2Q8NGD1 307 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 TMEM171Q8WVE6 324 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 KLHL29Q96CT2 875 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 DTNBP1Q96EV8 351 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 C11orf24Q96F05 449 aaPredicted RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 ZC3HAV1LQ96H79 300 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 ADGRG7Q96K78 797 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 NSUN5Q96P11 429 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 ZIM3Q96PE6 472 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ERP44Q9BS26 406 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PINK1Q9BXM7 581 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 OR10A4Q9H209 315 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 DSN1Q9H410 356 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 CXorf56Q9H5V9 222 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 FOLH1BQ9HBA9 442 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 FARSBQ9NSD9 589 aaKnown RBP6.55□□□□□ -1.36
YBX3-209ENST00000540747 FLRT3Q9NZU0 649 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 ZNF225Q9UK10 706 aa6.55□□□□□ -1.36
YBX3-209ENST00000540747 PROCRQ9UNN8 238 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms