RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 BNIPLQ7Z465 357 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 HSD17B13Q7Z5P4 300 aaPredicted RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 GPBP1Q86WP2 473 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 C9orf40Q8IXQ3 194 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 PEX5LQ8IYB4 626 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 ZNF433Q8N7K0 673 aaPredicted RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 DCAF4L2Q8NA75 395 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 LINC01555Q8NAE3 123 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 P3H4Q92791 437 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 TMEM45BQ96B21 275 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 VPS39Q96JC1 886 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 DEFB118Q96PH6 123 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 NLNQ9BYT8 704 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 CCSER1Q9C0I3 900 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 DDX47Q9H0S4 455 aaKnown RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 MIOXQ9UGB7 285 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 FAM153AQ9UHL3 310 aa2.25□□□□□ -2.05
MDM2-227ENST00000540709 ZNF223Q9UK11 482 aaPredicted RBP2.25□□□□□ -2.05
MDM2-227ENST00000540709 TRBV2A0A0J9YWF9 115 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 MACROD2A1Z1Q3 448 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 GOSR1O95249 250 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 ANP32DO95626 131 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 TOP1P11387 765 aaKnown RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 COPB2P35606 906 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 STK19P49842 368 aaPredicted RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 PPOXP50336 477 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 NLRP11P59045 1033 aaKnown RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 TIMM10P62072 90 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 RPL32P62910 135 aaKnown RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 HERVK_113P63132 956 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 ERVK-8P63133 956 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 EBI3Q14213 229 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 PRR4Q16378 134 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 PARP6Q2NL67 630 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 PRAMEF7Q5VXH5 474 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 DLEU7Q6UYE1 221 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 GOLGA7Q7Z5G4 137 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 YRDCQ86U90 279 aaKnown RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 VPS36Q86VN1 386 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 ZNF560Q96MR9 790 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 IL4I1Q96RQ9 567 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 CBWD1Q9BRT8 395 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 ERVK-6Q9BXR3 956 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 PRMT8Q9NR22 394 aaPredicted RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 ELOVL2Q9NXB9 296 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 RAB26Q9ULW5 256 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 KLHDC2Q9Y2U9 406 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 TDRKHQ9Y2W6 561 aaKnown RBP2.24□□□□□ -2.05
MDM2-227ENST00000540709 CDC42BPBQ9Y5S2 1711 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 CHD4Q14839 1912 aa2.24□□□□□ -2.05
MDM2-227ENST00000540709 CCDC69A6NI79 296 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 TLR4O00206 839 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 LATO43561 262 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 STK17BO94768 372 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 SLC35G4P0C7Q5 338 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 GNSP15586 552 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 CCNE1P24864 410 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 CCL11P51671 97 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 SGSHP51688 502 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 HNRNPFP52597 415 aaKnown RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 GFPT1Q06210 699 aaPredicted RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 RPA4Q13156 261 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 RAB35Q15286 201 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 ZKSCAN8Q15776 578 aaPredicted RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 BEND6Q5SZJ8 279 aaPredicted RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 SULT1C3Q6IMI6 304 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 UFSP1Q6NVU6 142 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 OLFM4Q6UX06 510 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 FRA10AC1Q70Z53 315 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 P4HA3Q7Z4N8 544 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 ZNF100Q8IYN0 542 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 CSNK1A1LQ8N752 337 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 BBS1Q8NFJ9 593 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 PHYHIPQ92561 330 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 DCUN1D4Q92564 292 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 SNX21Q969T3 373 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 TADA1Q96BN2 335 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 C11orf24Q96F05 449 aaPredicted RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 NDUFAF3Q9BU61 184 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 CARD6Q9BX69 1037 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 FTHL17Q9BXU8 183 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 GLIPR2Q9H4G4 154 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 MID1IP1Q9NPA3 183 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 STARD5Q9NSY2 213 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 DCAF13Q9NV06 445 aaKnown RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 NDUFA13Q9P0J0 144 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 BCAP29Q9UHQ4 241 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 NOL7Q9UMY1 257 aaKnown RBP2.23□□□□□ -2.05
MDM2-227ENST00000540709 USP6P35125 1406 aa2.23□□□□□ -2.05
MDM2-227ENST00000540709 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 RAD54L2Q9Y4B4 1467 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 TBL1XO60907 577 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 SLC6A8P48029 635 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 EMDP50402 254 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 UBXN1Q04323 297 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 TLE4Q04727 773 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 SRYQ05066 204 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 DPYSL3Q14195 570 aa2.22□□□□□ -2.05
MDM2-227ENST00000540709 MPPED2Q15777 294 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms