RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CGAP01215 116 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 POU2F1P14859 743 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 TAC1P20366 129 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 HMOX2P30519 316 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 TIA1P31483 386 aaKnown RBP eCLIP10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 CCKARP32238 428 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 EVI2BP34910 448 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 UGT2B10P36537 528 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 PSG6Q00889 435 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 ACSM2AQ08AH3 577 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 GLYR1Q49A26 553 aaPredicted RBP10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 CYP27C1Q4G0S4 372 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 TCHHL1Q5QJ38 904 aaPredicted RBP10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 ZNF678Q5SXM1 525 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 RAET1LQ5VY80 246 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 ACSM2BQ68CK6 577 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 SYT10Q6XYQ8 523 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 GPRIN3Q6ZVF9 776 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 BTLAQ7Z6A9 289 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 LCA5Q86VQ0 697 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 OR7G2Q8NG99 324 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 OR4N2Q8NGD1 307 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 METTL6Q8TCB7 284 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 C16orf78Q8WTQ4 265 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 DCAKDQ8WVC6 231 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 FIG4Q92562 907 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 CAVIN3Q969G5 261 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 PIK3IP1Q96FE7 263 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 ZNF845Q96IR2 970 aaPredicted RBP10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 MARK4Q96L34 752 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 BDH2Q9BUT1 245 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 ACPTQ9BZG2 426 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 DSN1Q9H410 356 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 PTGES2Q9H7Z7 377 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 KLHL28Q9NXS3 571 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 SENP1Q9P0U3 644 aa10.83□□□□□ -0.68
CBX3P4-202ENST00000540428 CCDC151A5D8V7 595 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 MYO1GB0I1T2 1018 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 SCO2O43819 266 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 FADS1O60427 444 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 LY6G6DO95868 133 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 ENO1P06733 434 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 SNRPAP09012 282 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CTAGE8P0CG41 777 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CHN1P15882 459 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 HK1P19367 917 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 DDCP20711 480 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 IMPDH1P20839 514 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 TCEA1P23193 301 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CLK3P49761 638 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 SUCLG1P53597 346 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 PSMD4P55036 377 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CLDN15P56746 228 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 ZNF155Q12901 538 aaPredicted RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 GUSBP1Q15486 140 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 UNC50Q53HI1 259 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 LGSNQ5TDP6 509 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 TIFABQ6ZNK6 161 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CTAGE4Q8IX94 777 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 UBQLNLQ8IYU4 475 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 METTL25Q8N6Q8 603 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 UHMK1Q8TAS1 419 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 APIPQ96GX9 242 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 BBS4Q96RK4 519 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 CCL19Q99731 98 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 PIGQQ9BRB3 760 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 PINK1Q9BXM7 581 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 OPN3Q9H1Y3 402 aaPredicted RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 FAM120CQ9NX05 1096 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 TAS2R7Q9NYW3 318 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 MRTO4Q9UKD2 239 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 GRID1Q9ULK0 1009 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 C19orf53Q9UNZ5 99 aaPredicted RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 WBP11Q9Y2W2 641 aaKnown RBP10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 ZNF337Q9Y3M9 751 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 AP4B1Q9Y6B7 739 aa10.82□□□□□ -0.68
CBX3P4-202ENST00000540428 A0A087WUV0 522 aaPredicted RBP10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 OR2M5A3KFT3 312 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 POC1B-GALNT4F8VUJ3 575 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 H7C1Q1 480 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 TMCC2O75069 709 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 NME6O75414 186 aaPredicted RBP10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 PSMG1O95456 288 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 IL33O95760 270 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 IFI6P09912 130 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 FCGR2AP12318 317 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 ATP5F1P24539 256 aaPredicted RBP10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 LOXP28300 417 aaPredicted RBP10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 KCNJ5P48544 419 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 PKNOX1P55347 436 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 RPS3AP61247 264 aaKnown RBP10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 SIRPAP78324 504 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 ZNF763Q0D2J5 394 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 LCP2Q13094 533 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 PON3Q15166 354 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 DECR1Q16698 335 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 FAM219BQ5XKK7 198 aa10.81□□□□□ -0.68
CBX3P4-202ENST00000540428 FAM214BQ7L5A3 538 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms