RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PEX1O43933 1283 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SHOX2O60902 331 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ICOSLGO75144 302 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 KCNH1O95259 989 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 IL33O95760 270 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 IGKV1D-16P01601 117 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 P04436 131 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GSNP06396 782 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 KRT16P08779 473 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ALOX5P09917 674 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ZCCHC18P0CG32 403 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 IL12BP29460 328 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GABRA3P34903 492 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 KRT20P35900 424 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 CASP3P42574 277 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 DNASE1L1P49184 302 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SMCPP49901 116 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 MEOX1P50221 254 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 TDGF1P3P51864 188 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PNLIPRP2P54317 469 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 RPS26P62854 115 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 MRPS22P82650 360 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FOXO1Q12778 655 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 UBAP2LQ14157 1087 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 DECR1Q16698 335 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GTDC1Q4AE62 458 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 AGKQ53H12 422 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 LRIF1Q5T3J3 769 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PRAMEF20Q5VT98 475 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC22A10Q63ZE4 541 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 BICRALQ6AI39 1079 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ZNF324BQ6AW86 544 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SLC2A7Q6PXP3 512 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 NUP54Q7Z3B4 507 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 C6orf120Q7Z4R8 191 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 CISD2Q8N5K1 135 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 TRIML2Q8N7C3 387 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 COX18Q8N8Q8 333 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ZFP62Q8NB50 900 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FAM98AQ8NCA5 519 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 OR2M7Q8NG81 312 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 OR5D16Q8NGK9 328 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FAM110BQ8TC76 370 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 MIPOL1Q8TD10 442 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GPR151Q8TDV0 419 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GRHL3Q8TE85 626 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 GTF2H4Q92759 462 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 DIO2Q92813 273 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 CDS1Q92903 461 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 MIB2Q96AX9 1013 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 RMND5BQ96G75 393 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ITCHQ96J02 903 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 COL21A1Q96P44 957 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 OR7D2Q96RA2 312 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 NODALQ96S42 347 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SLX1AQ9BQ83 275 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FAM173AQ9BQD7 235 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 YIPF4Q9BSR8 244 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 NMUR2Q9GZQ4 415 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PAIP1Q9H074 479 aaKnown RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FAM107BQ9H098 131 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PIGUQ9H490 435 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 PROK2Q9HC23 129 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 SAR1AQ9NR31 198 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 MRGBPQ9NV56 204 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 ASF1BQ9NVP2 202 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 CNIH4Q9P003 139 aa6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 FAF1Q9UNN5 650 aaPredicted RBP6.4□□□□□ -1.38
LPCAT3-209ENST00000540060 NINQ8N4C6 2090 aa6.4□□□□□ -1.39
LPCAT3-209ENST00000540060 A0A096LPI6 279 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 TRBV5-3A0A0A0MS03 114 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 A0A1W2PP18 115 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 PRAMEF25A6NGN4 478 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 LRRC3CA6NJW4 275 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 ADAM10O14672 748 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 SLC22A2O15244 555 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 ASNA1O43681 348 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 SNX3O60493 162 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 TRIM3O75382 744 aaPredicted RBP6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 REM1O75628 298 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 GLSO94925 669 aaPredicted RBP6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 KCNK2O95069 426 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 CRYABP02511 175 aaKnown RBP6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 FREM3P0C091 2139 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 CYP4B1P13584 511 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 ZNF24P17028 368 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 CNR1P21554 472 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 MATN1P21941 496 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 CHI3L1P36222 383 aaPredicted RBP6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 RFC3P40938 356 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 PTGDSP41222 190 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 RFX3P48380 749 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 TRPC1P48995 793 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 KHKP50053 298 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 MVDP53602 400 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 PSMD4P55036 377 aaKnown RBP6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 CASP9P55211 416 aa6.39□□□□□ -1.39
LPCAT3-209ENST00000540060 KCNJ2P63252 427 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms