RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SPRR3Q9UBC9 169 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 GPR45Q9Y5Y3 372 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 DNAJC13O75165 2243 aa16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 NUP214P35658 2090 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-203ENST00000540017 FLNBO75369 2602 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 TRGV5A0A0B4J1U4 118 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 AQP7O14520 342 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 PRRG2O14669 202 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 SNPHO15079 494 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 FADS1O60427 444 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 IL33O95760 270 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 HMGN2P05204 90 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 IL12AP29459 219 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 RFX3P48380 749 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 CCT3P49368 545 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 PER3P56645 1201 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 MRPS22P82650 360 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 ADORA2A-AS1P86434 159 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 DECR1Q16698 335 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 LSM12Q3MHD2 195 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 SPATA19Q7Z5L4 167 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 CLEC4FQ8N1N0 589 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 OR8J2Q8NGG1 315 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 OR5M9Q8NGP3 310 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 OR1J4Q8NGS1 313 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 LRRC8CQ8TDW0 803 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 TESCQ96BS2 214 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 RMND5BQ96G75 393 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 MARK4Q96L34 752 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 RTN4RQ9BZR6 473 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 ACKR4Q9NPB9 350 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 SERHLQ9NQF3 203 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 INTS9Q9NV88 658 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 FBXO34Q9NWN3 711 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 B4GALT7Q9UBV7 327 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 MAPRE3Q9UPY8 281 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 MEMO1Q9Y316 297 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 USH1CQ9Y6N9 552 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 FREM3P0C091 2139 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 DOPEY1Q5JWR5 2465 aa16.7■□□□□ 0.26
SNRPA1-203ENST00000540017 TTC36A6NLP5 189 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 CFLARO15519 480 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 HCN1O60741 890 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 HPNP05981 417 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 MAN2A2P49641 1150 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 PRR5P85299 388 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 TP53BP2Q13625 1128 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 LASP1Q14847 261 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 GXYLT1Q4G148 440 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 SPANXN4Q5MJ08 99 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 NXNQ6DKJ4 435 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 HIST2H2BCQ6DN03 193 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 OR5M10Q6IEU7 315 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 ZAR1Q86SH2 424 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 ANKRD46Q86W74 232 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 RPRMLQ8N4K4 120 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 OR5AK3PQ8NH89 298 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 NEIL3Q8TAT5 605 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 FAM110BQ8TC76 370 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 ACTRT2Q8TDY3 377 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 ITLN2Q8WWU7 325 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 DMRTA2Q96SC8 542 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 PNPLA3Q9NST1 481 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 GPATCH2Q9NW75 528 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 WIF1Q9Y5W5 379 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 KCNE3Q9Y6H6 103 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 ICE1Q9Y2F5 2266 aa16.69■□□□□ 0.26
SNRPA1-203ENST00000540017 OR14I1A6ND48 311 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 RNASET2O00584 256 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 TRAPPC6AO75865 159 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 ALOX5P09917 674 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 ESRRAP11474 423 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 ELAVL4P26378 380 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 EVI2BP34910 448 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 KIR3DL1P43629 444 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 DGKQP52824 942 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 FAM174BQ3ZCQ3 159 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 SPDYE7PQ495Y7 208 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 VPS26BQ4G0F5 336 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 EIPR1Q53HC9 387 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 ZCCHC12Q6PEW1 402 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 FIGNL1Q6PIW4 674 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 EPGNQ6UW88 154 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 APOOLQ6UXV4 268 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 MARVELD2Q8N4S9 558 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 SFXN5Q8TD22 340 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 DYDC1Q8WWB3 177 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 CKAP2Q8WWK9 683 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 EXO5Q9H790 373 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 NEUROD4Q9HD90 331 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 PLEKHB1Q9UF11 243 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 FBXL2Q9UKC9 423 aa16.68■□□□□ 0.26
SNRPA1-203ENST00000540017 SETXQ7Z333 2677 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SPTAN1Q13813 2472 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 E9PBE3 544 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 E9PLN8 166 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 SCO2O43819 266 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 DIAPH2O60879 1101 aa16.67■□□□□ 0.26
SNRPA1-203ENST00000540017 KCNK2O95069 426 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms