RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SNX8Q9Y5X2 465 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 KCNE2Q9Y6J6 123 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 CSNK1G3Q9Y6M4 447 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 SPTA1P02549 2419 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 ADAMTS20P59510 1910 aa7.21□□□□□ -1.26
CCDC60-204ENST00000539847 MAST4O15021 2626 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 IGLV3-16A0A075B6K0 115 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 A0A0X1KG70 313 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 A0A1B0GVM2 712 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 A0A1W2PQL4 384 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PIPSLA2A3N6 862 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ANTXRLA6NF34 631 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 GABRR3A8MPY1 467 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TLR4O00206 839 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TERTO14746 1132 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TFECO14948 347 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 BCAT2O15382 392 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PRODHO43272 600 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PRKYO43930 277 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TLR5O60602 858 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ADAM11O75078 769 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CSO75390 466 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 LATS1O95835 1130 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 GUCA1CO95843 209 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PEPDP12955 493 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TYRP14679 529 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CTRB1P17538 263 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 NAT1P18440 290 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ITGB6P18564 788 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 IDSP22304 550 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 AOAHP28039 575 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TALDO1P37837 337 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 GDF5P43026 501 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 RGRP47804 291 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 STK19P49842 368 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 MVDP53602 400 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CRISP3P54108 245 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SRP54P61011 504 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 EFNB1P98172 346 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SPIBQ01892 262 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SEMG2Q02383 582 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF177Q13360 481 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CPSF6Q16630 551 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TATDN3Q17R31 274 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM44Q2T9K0 475 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SPIN4Q56A73 249 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PYDC2Q56P42 97 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CLLU1Q5K131 121 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 C10orf120Q5SQS8 335 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ARMC12Q5T9G4 340 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TRIQKQ629K1 86 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CTRB2Q6GPI1 263 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 FAM122CQ6P4D5 195 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM107Q6UX40 140 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TRILQ7L0X0 811 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ANKRD46Q86W74 232 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 KIF18BQ86Y91 864 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 MCATQ8IVS2 390 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 LAX1Q8IWV1 398 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SDR16C5Q8N3Y7 309 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 OR10Q1Q8NGQ4 319 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CLHC1Q8NHS4 586 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 WDR20Q8TBZ3 569 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SPPL2AQ8TCT8 520 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PIH1D2Q8WWB5 315 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 AKAP1Q92667 903 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 NACC2Q96BF6 587 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 APOLD1Q96LR9 279 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ZNF578Q96N58 590 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SORCS2Q96PQ0 1159 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 LYSMD1Q96S90 227 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 NIPSNAP1Q9BPW8 284 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TMEM43Q9BTV4 400 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 POLDIP3Q9BY77 421 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 POLR2J2Q9GZM3 115 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 MMP28Q9H239 520 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PIGUQ9H490 435 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 FBRSQ9HAH7 460 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 EXOSC4Q9NPD3 245 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 C1GALT1Q9NS00 363 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 SNTG1Q9NSN8 517 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 ASB6Q9NWX5 421 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TXNL4BQ9NX01 149 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TAS2R7Q9NYW3 318 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 GLTPQ9NZD2 209 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 EMC3Q9P0I2 261 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 RABL2AQ9UBK7 228 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TESQ9UGI8 421 aaKnown RBP7.2□□□□□ -1.26
CCDC60-204ENST00000539847 GLS2Q9UI32 602 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TEKT2Q9UIF3 430 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 TMCC3Q9ULS5 477 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 RABL2BQ9UNT1 228 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 FKBP7Q9Y680 259 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CDH10Q9Y6N8 788 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 CELSR3Q9NYQ7 3312 aa7.2□□□□□ -1.26
CCDC60-204ENST00000539847 PTPRQQ9UMZ3 2332 aa7.19□□□□□ -1.26
CCDC60-204ENST00000539847 NYNRINQ9P2P1 1898 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms