RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ALPPP05187 535 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 CSF3P09919 207 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 DRD2P14416 443 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TGM3Q08188 693 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 GPR68Q15743 365 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 ZC3H14Q6PJT7 736 aaKnown RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 OR2L5Q8NG80 312 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 PATE1Q8WXA2 126 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 PIK3R3Q92569 461 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 DIO2Q92813 273 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 FGF14Q92915 247 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 PCBD2Q9H0N5 130 aa13.16□□□□□ -0.3
UBE3B-210ENST00000539599 ISG20L2Q9H9L3 353 aaKnown RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 MRPS2Q9Y399 296 aaKnown RBP13.16□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3DA0A087WVF3 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3IA0A087WXS9 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3EA0A087X179 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3KA0A087X1G2 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3FA6NER0 549 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3LB9A6J9 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PROM1O43490 865 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TMCC2O75069 709 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3HP0C7X1 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 CCNYL3P0C7X3 344 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 CSNK2A2P19784 350 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 CELP19835 753 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ENDOUP21128 410 aaKnown RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 AHRP35869 848 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 OMPP47874 163 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 CDH11P55287 796 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 RGS8P57771 180 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SGCGQ13326 291 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TRMT12Q53H54 448 aaKnown RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3GQ6DHY5 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3CQ6IPX1 549 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF517Q6ZMY9 492 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PLEKHM3Q6ZWE6 761 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 TBC1D3Q8IZP1 549 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 RASSF5Q8WWW0 418 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF486Q96H40 463 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ZNF681Q96N22 645 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 ACSL5Q9ULC5 683 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 A0A0B4J293 547 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 FABP12A6NFH5 140 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 LINC01565O15544 149 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 HPGDSO60760 199 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 LDB3O75112 727 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 CPEP16870 476 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 GDI1P31150 447 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 GPM6BQ13491 265 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 GPR50Q13585 617 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 MAPK14Q16539 360 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PYDC2Q56P42 97 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 RRM2BQ7LG56 351 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SIRT6Q8N6T7 355 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 OR6F1Q8NGZ6 308 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 OR10G6Q8NH81 332 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 PFN4Q8NHR9 129 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 RNF31Q96EP0 1072 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SAMD8Q96LT4 415 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 FYTTD1Q96QD9 318 aaKnown RBP13.15□□□□□ -0.3
UBE3B-210ENST00000539599 MCHR1Q99705 422 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 SLC7A7Q9UM01 511 aa13.15□□□□□ -0.3
UBE3B-210ENST00000539599 GSAPA4D1B5 854 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 PRODHO43272 600 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 EIF2S1P05198 315 aaKnown RBP13.15□□□□□ -0.31
UBE3B-210ENST00000539599 ACP2P11117 423 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 PVRP15151 417 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 PBX2P40425 430 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 SMIM11AP58511 58 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 PARM1Q6UWI2 310 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 IL20RBQ6UXL0 311 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 WDR88Q6ZMY6 472 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 GDF7Q7Z4P5 450 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 UBQLNLQ8IYU4 475 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 OR51G2Q8NGK0 314 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 SLC17A9Q9BYT1 436 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 DPH1Q9BZG8 443 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 BCL2L10Q9HD36 194 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 NUFIP1Q9UHK0 495 aaKnown RBP13.15□□□□□ -0.31
UBE3B-210ENST00000539599 ADAM29Q9UKF5 820 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 NDRG2Q9UN36 371 aaKnown RBP13.15□□□□□ -0.31
UBE3B-210ENST00000539599 CLCA2Q9UQC9 943 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 LIPT1Q9Y234 373 aa13.15□□□□□ -0.31
UBE3B-210ENST00000539599 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 NR2F6P10588 404 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 TBXA2RP21731 343 aa13.14□□□□□ -0.31
UBE3B-210ENST00000539599 MLC1Q15049 377 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms