RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CENPFP49454 3210 aa12.43□□□□□ -0.42
UBE3B-209ENST00000539584 FEZF1A0PJY2 475 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ISM1B1AKI9 464 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 J3QRE1 110 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ERVH48-1M5A8F1 160 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 MOSPD3O75425 235 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CXCL14O95715 111 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CHRM5P08912 532 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 NDUFV2P19404 249 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CSNK2A2P19784 350 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 PAICSP22234 425 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 TRIM23P36406 574 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 OR3A3P47888 321 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 AVPR1BP47901 424 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CEBPEQ15744 281 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 MRM1Q6IN84 353 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 TMEM107Q6UX40 140 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ZNF620Q6ZNG0 422 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 FAM109AQ8N4B1 249 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ACBD7Q8N6N7 88 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SPRYD4Q8WW59 207 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RFT1Q96AA3 541 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SENP5Q96HI0 755 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RNF32Q9H0A6 362 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SLC38A1Q9H2H9 487 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 MTG2Q9H4K7 406 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 MCUBQ9NWR8 336 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 BABAM2Q9NXR7 383 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 COPZ2Q9P299 210 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CLCA3PQ9Y6N3 262 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CEP350Q5VT06 3117 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 GTPBP1O00178 669 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RNF13O43567 381 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 LALBAP00709 142 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 PEPDP12955 493 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ACSL1P33121 698 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 CAV3P56539 151 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 TAS2R43P59537 309 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 GPLD1P80108 840 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ZIC1Q15915 447 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 BTBD16Q32M84 506 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 HNRNPA1L2Q32P51 320 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ADCK2Q7Z695 626 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 GPALPP1Q8IXQ4 340 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 C2orf73Q8N5S3 287 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SLC37A3Q8NCC5 494 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ARRDC3Q96B67 414 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 AHCYL2Q96HN2 611 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 FAM46AQ96IP4 442 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SARGQ9BW04 601 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 PRR14Q9BWN1 585 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 MKRN2Q9H000 416 aaKnown RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SLC28A3Q9HAS3 691 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 TRIM36Q9NQ86 728 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 ZNF275Q9NSD4 429 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 SEMA4GQ9NTN9 838 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 PTGFRNQ9P2B2 879 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RABL2AQ9UBK7 228 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-209ENST00000539584 EXTL2Q9UBQ6 330 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RABL2BQ9UNT1 228 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 NCKAP1Q9Y2A7 1128 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 IRAK3Q9Y616 596 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 RNF215Q9Y6U7 377 aa12.42□□□□□ -0.42
UBE3B-209ENST00000539584 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 NDUFB5O43674 189 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 NOS1APO75052 506 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-209ENST00000539584 RFPL3O75679 317 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 APOL3O95236 402 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 SLC35G4P0C7Q5 338 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 HIST1H1TP22492 207 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-209ENST00000539584 AHRP35869 848 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 PRKAG1P54619 331 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 RAG2P55895 527 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBE3B-209ENST00000539584 DHCR24Q15392 516 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 ESCO2Q56NI9 601 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 PYHIN1Q6K0P9 492 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 RPL13AP3Q6NVV1 102 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 WASH2PQ6VEQ5 465 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 TMEM91Q6ZNR0 172 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 OAFQ86UD1 273 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 LRRC17Q8N6Y2 441 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 TP53I13Q8NBR0 393 aaPredicted RBP12.41□□□□□ -0.42
UBE3B-209ENST00000539584 OR4F15Q8NGB8 312 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 OR4Q3Q8NH05 313 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
UBE3B-209ENST00000539584 TCEAL4Q96EI5 215 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 OR7D2Q96RA2 312 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 EMC7Q9NPA0 242 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 CNIH4Q9P003 139 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 WNT6Q9Y6F9 365 aa12.41□□□□□ -0.42
UBE3B-209ENST00000539584 CRYZL1O95825 349 aa12.4□□□□□ -0.42
UBE3B-209ENST00000539584 ADH1CP00326 375 aa12.4□□□□□ -0.42
UBE3B-209ENST00000539584 ADH5P11766 374 aa12.4□□□□□ -0.42
UBE3B-209ENST00000539584 GNSP15586 552 aa12.4□□□□□ -0.42
UBE3B-209ENST00000539584 ELK1P19419 428 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms