RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 ZWINTO95229 277 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 KCNH1O95259 989 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 IL33O95760 270 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 SNRPB2P08579 225 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 DHRS4L1P0CG22 281 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 PRPS2P11908 318 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 CYP4B1P13584 511 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 CPN1P15169 458 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 MAP3K8P41279 467 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 GAS1P54826 345 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 MANFP55145 182 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 GANABQ14697 944 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 SMU1Q2TAY7 513 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ZNF385BQ569K4 471 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 TNFAIP8L3Q5GJ75 292 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 NSUN5P2Q63ZY6 315 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ANKRD26P1Q6NSI1 321 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 AAGABQ6PD74 315 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ENPP6Q6UWR7 440 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 MEX3BQ6ZN04 569 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 SEM1Q6ZVN7 128 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ZNF551Q7Z340 670 aaPredicted RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 YRDCQ86U90 279 aaKnown RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 IFNEQ86WN2 208 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ZNF295-AS1Q8N0V1 137 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 NATD1Q8N6N6 113 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 CDRT4Q8N9R6 151 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 OR4N2Q8NGD1 307 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 OR14L1PQ8NHC6 308 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 CLHC1Q8NHS4 586 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 AGR3Q8TD06 166 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 CIDECQ96AQ7 238 aaPredicted RBP10.52□□□□□ -0.73
RTN3-209ENST00000538995 PGM2Q96G03 612 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 WDYHV1Q96HA8 205 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 MS4A4EQ96PG1 132 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 UCK2Q9BZX2 261 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 SDHAF3Q9NRP4 125 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ATAD3AQ9NVI7 634 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 TAS2R10Q9NYW0 307 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 ZDHHC2Q9UIJ5 367 aa10.52□□□□□ -0.73
RTN3-209ENST00000538995 NINQ8N4C6 2090 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 ANKHD1Q8IWZ3 2542 aaKnown RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 NKX2-6A6NCS4 301 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 MBD3L4A6NDZ8 208 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 MBD3L3A6NE82 208 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 MBD3L5A6NJ08 208 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 DVL2O14641 736 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 FADS1O60427 444 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 PEX11AO75192 247 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 NKX2-2O95096 273 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 HSPA4LO95757 839 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 MYZAPP0CAP1 466 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 LCN1P31025 176 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 CEACAM8P31997 349 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 PEX19P40855 299 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 CLK3P49761 638 aaKnown RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 GFRA1P56159 465 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 DSCR4P56555 118 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 C21orf58P58505 322 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 PRR5P85299 388 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 MAD2L1Q13257 205 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 GAB1Q13480 694 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 RCAN2Q14206 197 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 C6orf136Q5SQH8 315 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 CEP85LQ5SZL2 805 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 DCST1Q5T197 706 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 ZCCHC12Q6PEW1 402 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 EXOC3L1Q86VI1 746 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 DMRTC2Q8IXT2 367 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 FADS6Q8N9I5 356 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 FNDC5Q8NAU1 212 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 OR4K17Q8NGC6 315 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 MBD3L2Q8NHZ7 208 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 ZPLD1Q8TCW7 415 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 GIMAP5Q96F15 307 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 PKNOX2Q96KN3 472 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 C3orf30Q96M34 536 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 CALHM2Q9HA72 323 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 ASIC5Q9NY37 505 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 PPP4R1LQ9P1A2 415 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 ZNF629Q9UEG4 869 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 DKKL1Q9UK85 242 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 FBXL2Q9UKC9 423 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 CAMK2AQ9UQM7 478 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.51□□□□□ -0.73
RTN3-209ENST00000538995 TACC2O95359 2948 aa10.51□□□□□ -0.73
RTN3-209ENST00000538995 ENO4A6NNW6 628 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 EMC8O43402 210 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 SKAP2O75563 359 aaPredicted RBP10.5□□□□□ -0.73
RTN3-209ENST00000538995 IL2RAP01589 272 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 NGFRP08138 427 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 PRPS1L1P21108 318 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 CHMP24386 653 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 DPP4P27487 766 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 GABRA3P34903 492 aa10.5□□□□□ -0.73
RTN3-209ENST00000538995 ABCE1P61221 599 aaKnown RBP10.5□□□□□ -0.73
RTN3-209ENST00000538995 PTGR1Q14914 329 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms