RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 LDB3O75112 727 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
LIMK1-208ENST00000538333 IFNGR2P38484 337 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 GAS1P54826 345 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 PPP1CAP62136 330 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 DUSP8Q13202 625 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 SPHARQ15513 63 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 TIMM50Q3ZCQ8 353 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF542PQ5EBM4 170 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF836Q6ZNA1 936 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 RASSF6Q6ZTQ3 369 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 SLC34A3Q8N130 599 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 CYP4Z2PQ8N1L4 340 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 FLCNQ8NFG4 579 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 OR5T3Q8NGG3 340 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF350Q9GZX5 532 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 RACGAP1Q9H0H5 632 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 PIGUQ9H490 435 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 TRIM45Q9H8W5 580 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-208ENST00000538333 CNIH4Q9P003 139 aa13.08□□□□□ -0.32
LIMK1-208ENST00000538333 DIMT1Q9UNQ2 313 aaKnown RBP13.08□□□□□ -0.32
LIMK1-208ENST00000538333 A0A087WV62 115 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 AP3D1O14617 1153 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 KLF4O43474 513 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 HCRTR1O43613 425 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 KIAA0513O60268 411 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PLOD3O60568 738 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 GPX5O75715 221 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 UBXN7O94888 489 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 GLULP15104 373 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PPP5CP53041 499 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 FZD2Q14332 565 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SNAPC1Q16533 368 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 DECR1Q16698 335 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SLC27A4Q6P1M0 643 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PAQR6Q6TCH4 344 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 GDF7Q7Z4P5 450 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF554Q86TJ5 538 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 OR52I1Q8NGK6 324 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 TMEM163Q8TC26 289 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 TOE1Q96GM8 510 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 FAM46AQ96IP4 442 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 MCHR1Q99705 422 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SAP130Q9H0E3 1048 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 MRPS18AQ9NVS2 196 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 FUOMA2VDF0 154 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 OR5F1O95221 314 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 THBS1P07996 1170 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 CD40LGP29965 261 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SOX3P41225 446 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 MAP3K8P41279 467 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF136P52737 540 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SHC2P98077 582 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 MLLT1Q03111 559 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PERM1Q5SV97 790 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 CCNJQ5T5M9 372 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 Q6ZS52 159 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF761Q86XN6 746 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 CA13Q8N1Q1 262 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF655Q8N720 491 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 POGLUT1Q8NBL1 392 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 DOK4Q8TEW6 326 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SNRNP27Q8WVK2 155 aaKnown RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 SLC41A3Q96GZ6 507 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 GAS2L1Q99501 681 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-208ENST00000538333 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
LIMK1-208ENST00000538333 OR5K3A6NET4 321 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 GPR75O95800 540 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 FPR3P25089 353 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 IFNA8P32881 189 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 MGAT2Q10469 447 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 MAP4K2Q12851 820 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 LARS2Q15031 903 aaKnown RBP13.06□□□□□ -0.32
LIMK1-208ENST00000538333 MAPK14Q16539 360 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 NIPAL1Q6NVV3 410 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF438Q7Z4V0 828 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 TAF8Q7Z7C8 310 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 PIGXQ8TBF5 258 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 ZNF576Q9H609 170 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 ADAP2Q9NPF8 381 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 DUSP22Q9NRW4 184 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 MAT2BQ9NZL9 334 aa13.06□□□□□ -0.32
LIMK1-208ENST00000538333 DAPK2Q9UIK4 370 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms