RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 PCTPQ9UKL6 214 aa10.27□□□□□ -0.77
CLSTN3-207ENST00000537408 PLSCR5A0PG75 271 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 UBE2CO00762 179 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ENTPD6O75354 484 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SPDEFO95238 335 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF14P17017 642 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SELENOPP49908 381 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 COTL1Q14019 142 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 PTGES3Q15185 160 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 MARC1Q5VT66 337 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 TMEM207Q6UWW9 146 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF852Q6ZMS4 543 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 QSOX2Q6ZRP7 698 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 RGL4Q8IZJ4 473 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 RXFP4Q8TDU9 374 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 DNAJC27Q9NZQ0 273 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 KLHL42Q9P2K6 505 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 UBE2QL1A1L167 161 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 AGAP14A8MT82 685 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 PRKRAO75569 313 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 LY86O95711 162 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 HLA-DPB1P04440 258 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SAGP10523 405 aaPredicted RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 CRISP1P54107 249 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 RPS25P62851 125 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ACER2Q5QJU3 275 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SUSD6Q92537 303 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 KHSRPQ92945 711 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ACSL6Q9UKU0 697 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 MEIS3P2A8K0S8 358 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 HCRTO43612 131 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 MTHFD2P13995 350 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 CNR2P34972 360 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 IRS1P35568 1242 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 RAB5CP51148 216 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 CTSCP53634 463 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 RBBP4Q09028 425 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 MAP4K2Q12851 820 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ZCCHC12Q6PEW1 402 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 MILR1Q7Z6M3 343 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 PUSL1Q8N0Z8 303 aaKnown RBP10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 NEIL3Q8TAT5 605 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 EDARADDQ8WWZ3 215 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 SPACA7Q96KW9 195 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 DERL2Q9GZP9 239 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 TAS2R13Q9NYV9 303 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF69Q9UC07 566 aa10.26□□□□□ -0.77
CLSTN3-207ENST00000537408 HIDE1A8MVS5 230 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 TCAPO15273 167 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 SIGLEC5O15389 551 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 FZD7O75084 574 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 HOXC8P31273 242 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 TSPAN7P41732 249 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 SIGLEC14Q08ET2 396 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 ZRANB3Q5FWF4 1079 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 LDB1Q86U70 411 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 GPSM1Q86YR5 675 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 CRYBG2Q8N1P7 616 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 NKAPQ8N5F7 415 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 L3MBTL4Q8NA19 623 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 MS4A3Q96HJ5 214 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 HBEGFQ99075 208 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 FUZQ9BT04 418 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 ATP13A1Q9HD20 1204 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 A0A1W2PQH9 124 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 E9PQ18 207 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 GABRDO14764 452 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 SUSD5O60279 629 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 GABRA5P31644 462 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 DLGAP4Q9Y2H0 992 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 A0A1B0GTL3 188 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 OTCP00480 354 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 CD2P06729 351 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 DRD2P14416 443 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 ELK1P19419 428 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 NPR2P20594 1047 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 WNT4P56705 351 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 ACTR1AP61163 376 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 AP1S1P61966 158 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 FABP9Q0Z7S8 132 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 ITPRIPL2Q3MIP1 535 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 PTRHD1Q6GMV3 140 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 RNF113BQ8IZP6 322 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 STK35Q8TDR2 534 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC35F5Q8WV83 523 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 FATE1Q969F0 183 aa10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 SEBOXQ9HB31 216 aaPredicted RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 PRRC2BQ5JSZ5 2229 aaKnown RBP10.25□□□□□ -0.77
CLSTN3-207ENST00000537408 NPEPPSL1A6NEC2 478 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SLC38A8A6NNN8 435 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 WASH3PC4AMC7 463 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 ZNF593O00488 134 aaPredicted RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 MBP02144 154 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 EDN1P05305 212 aa10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 SRPRAP08240 638 aaKnown RBP10.24□□□□□ -0.77
CLSTN3-207ENST00000537408 BPIP17213 487 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms