RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 EXOSC3Q9NQT5 275 aaKnown RBP2.67□□□□□ -1.98
CCDC7-208ENST00000537047 DAZ3Q9NR90 486 aaKnown RBP2.67□□□□□ -1.98
CCDC7-208ENST00000537047 PIGVQ9NUD9 493 aa2.67□□□□□ -1.98
CCDC7-208ENST00000537047 PSG11Q9UQ72 335 aa2.67□□□□□ -1.98
CCDC7-208ENST00000537047 DHRS7Q9Y394 339 aa2.67□□□□□ -1.98
CCDC7-208ENST00000537047 WSB1Q9Y6I7 421 aa2.67□□□□□ -1.98
CCDC7-208ENST00000537047 LRIT2A6NDA9 550 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 WWP2O00308 870 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 BUB1O43683 1085 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 MMP23AO75900 390 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 HOXB7P09629 217 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 SDC1P18827 310 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 RPS10P46783 165 aaKnown RBP2.66□□□□□ -1.98
CCDC7-208ENST00000537047 PITPNBP48739 271 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 EPC2Q52LR7 807 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 CMPK2Q5EBM0 449 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 PRR5LQ6MZQ0 368 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 IYDQ6PHW0 289 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 DPY19L2P2Q6ZN68 376 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 ADAMTSL2Q86TH1 951 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 IQCA1Q86XH1 822 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 SERPINA12Q8IW75 414 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 BBS1Q8NFJ9 593 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 OR4F17Q8NGA8 305 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 FNDC8Q8TC99 324 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 MARCH1Q8TCQ1 289 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 RNASE8Q8TDE3 154 aaKnown RBP2.66□□□□□ -1.98
CCDC7-208ENST00000537047 OR4F4Q96R69 305 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 NLNQ9BYT8 704 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 NACA2Q9H009 215 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 C2orf40Q9H1Z8 148 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 ARGLU1Q9NWB6 273 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-208ENST00000537047 PURGQ9UJV8 347 aaKnown RBP2.66□□□□□ -1.98
CCDC7-208ENST00000537047 BARX2Q9UMQ3 279 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-208ENST00000537047 FKBP7Q9Y680 259 aa2.66□□□□□ -1.98
CCDC7-208ENST00000537047 A0A1B0GUA9 196 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 FAM170AA1A519 330 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 TMEM110-MUSTN1A8MSY1 372 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 NPIPA2E9PIF3 369 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 PDLIM1O00151 329 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 NME2P1O60361 137 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 MAT2AP31153 395 aaKnown RBP2.65□□□□□ -1.99
CCDC7-208ENST00000537047 NF2P35240 595 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 POU3F4P49335 361 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 SSTP61278 116 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 IL18R1Q13478 541 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 PDE7AQ13946 482 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 CAMK4Q16566 473 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 CARTPTQ16568 116 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 SLC39A12Q504Y0 691 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 BNIPLQ7Z465 357 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 TMEM110Q86TL2 294 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 EEF2KMTQ96G04 330 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 TM2D1Q9BX74 207 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 GLT8D2Q9H1C3 349 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 ALG9Q9H6U8 611 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 COMMD8Q9NX08 183 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 LHX3Q9UBR4 397 aa2.65□□□□□ -1.99
CCDC7-208ENST00000537047 CCDC69A6NI79 296 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 IGSF6O95976 241 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 PTBP1P26599 531 aaKnown RBP eCLIP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 CASP3P42574 277 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 NLRP11P59045 1033 aaKnown RBP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 ARF5P84085 180 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 BCL2L1Q07817 233 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 PTGES3Q15185 160 aaKnown RBP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 PRAMEF7Q5VXH5 474 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 ZNF410Q86VK4 478 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 GPBP1Q86WP2 473 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 CHCHD4Q8N4Q1 142 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 P3H4Q92791 437 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 DLX4Q92988 240 aaPredicted RBP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 DNAJA3Q96EY1 480 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 VMP1Q96GC9 406 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 DEFB118Q96PH6 123 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 DESI2Q9BSY9 194 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 ABCG8Q9H221 673 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 GLIPR2Q9H4G4 154 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 FAM124BQ9H5Z6 455 aaPredicted RBP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 HOMER3Q9NSC5 361 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 NECAP2Q9NVZ3 263 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 ELOVL2Q9NXB9 296 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 NDUFA13Q9P0J0 144 aa2.64□□□□□ -1.99
CCDC7-208ENST00000537047 TRMT6Q9UJA5 497 aaKnown RBP2.64□□□□□ -1.99
CCDC7-208ENST00000537047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 FMO6PO60774 539 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 SDC3O75056 442 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 ZNF254O75437 659 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 HTR1FP30939 366 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 SGSHP51688 502 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 BEND6Q5SZJ8 279 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 METTL11BQ5VVY1 283 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 PARGQ86W56 976 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 C9orf40Q8IXQ3 194 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 ANKRD49Q8WVL7 239 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 PTP4A1Q93096 173 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 TMEM45BQ96B21 275 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 TADA1Q96BN2 335 aa2.63□□□□□ -1.99
CCDC7-208ENST00000537047 C11orf24Q96F05 449 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-208ENST00000537047 VPS39Q96JC1 886 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms