RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 C11orf16Q9NQ32 467 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 FBXO8Q9NRD0 319 aa12.68□□□□□ -0.38
SMG6-203ENST00000536871 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMG6-203ENST00000536871 A0A087WUU8 490 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 A0A1W2PS29 197 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 CCDC85CA6NKD9 419 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 FAM170BA6NMN3 283 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 B4DGG1 531 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 CLDN4O14493 209 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 ACP2P11117 423 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 NID1P14543 1247 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 PVRP15151 417 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 TNNI3P19429 210 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 BMXP51813 675 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 NUDT6P53370 316 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 SHC2P98077 582 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 C1DQ13901 141 aaKnown RBP12.67□□□□□ -0.38
SMG6-203ENST00000536871 PRTGQ2VWP7 1150 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 DCST2Q5T1A1 773 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 TMEM236Q5W0B7 351 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 AMER2Q8N7J2 671 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 OR6C4Q8NGE1 309 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 OIT3Q8WWZ8 545 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 RAB33BQ9H082 229 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 AMBNQ9NP70 447 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 MAT2BQ9NZL9 334 aa12.67□□□□□ -0.38
SMG6-203ENST00000536871 FAM227AF5H4B4 570 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 FGF17O60258 216 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 KIAA0513O60268 411 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 OR10H2O60403 315 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 ENTPD6O75354 484 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 NKX2-2O95096 273 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 TP53P04637 393 aaPredicted RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 PROS1P07225 676 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 MAP3K8P41279 467 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 EPHA4P54764 986 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 HNRNPKP61978 463 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMG6-203ENST00000536871 EEF1A1P68104 462 aaKnown RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 POU6F2P78424 691 aaPredicted RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 GINS1Q14691 196 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 ARMCX4Q5H9R4 360 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 THOC7Q6I9Y2 204 aaKnown RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 RPL13AP3Q6NVV1 102 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 C16orf87Q6PH81 154 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 MBOAT2Q6ZWT7 520 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 COMTD1Q86VU5 262 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 PROKR2Q8NFJ6 384 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 RFKQ969G6 155 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 SLC41A3Q96GZ6 507 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 SLC38A3Q99624 504 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 WFDC6Q9BQY6 131 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 MMP27Q9H306 513 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 TTYH1Q9H313 450 aaPredicted RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 SIAEQ9HAT2 523 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 ADAP2Q9NPF8 381 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 MRPS18AQ9NVS2 196 aaKnown RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 HEMK1Q9Y5R4 338 aaPredicted RBP12.66□□□□□ -0.38
SMG6-203ENST00000536871 ATG2BQ96BY7 2078 aa12.66□□□□□ -0.38
SMG6-203ENST00000536871 A0A1W2PR77 199 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 TRAPPC13A5PLN9 417 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 M0R082 166 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 CCRL2O00421 344 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SOX14O95416 240 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 NSA2O95478 260 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 HMGN1P05114 100 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 CELA2BP08218 269 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 ST6GAL1P15907 406 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 GALNSP34059 522 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 LIPAP38571 399 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 AVPR1BP47901 424 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 RGS6P49758 472 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 BCAP31P51572 246 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 PSMD4P55036 377 aaKnown RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 C1orf61Q13536 156 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 NDUFA5Q16718 116 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZNF542PQ5EBM4 170 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SLC36A4Q6YBV0 504 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZNF438Q7Z4V0 828 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 C17orf82Q86X59 251 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 OR4N5Q8IXE1 308 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 VWA5B2Q8N398 1253 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ARL14Q8N4G2 192 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 ARHGEF39Q8N4T4 335 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 TCEANCQ8N8B7 351 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 SH3YL1Q96HL8 342 aaPredicted RBP12.65□□□□□ -0.38
SMG6-203ENST00000536871 ZNF285Q96NJ3 590 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 IL4I1Q96RQ9 567 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 MGLLQ99685 303 aa12.65□□□□□ -0.38
SMG6-203ENST00000536871 KLHL25Q9H0H3 589 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms