RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SLC35A4Q96G79 324 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 KIR3DX1Q9H7L2 352 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 OR6C2Q9NZP2 312 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 MOSPD1Q9UJG1 213 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 POLR1CO15160 346 aaPredicted RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 OR5F1O95221 314 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 CSF3P09919 207 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 RGS8P57771 180 aaPredicted RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 BTN3A2P78410 334 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 IFITM2Q01629 132 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 CCDC92Q53HC0 331 aaPredicted RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 TJAP1Q5JTD0 557 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 TYW3Q6IPR3 259 aaKnown RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 MTSS1LQ765P7 747 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 LHFPL3Q86UP9 236 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 NKAIN4Q8IVV8 208 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 KAT2AQ92830 837 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 CHFRQ96EP1 664 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 OR2B2Q9GZK3 357 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 SYNPO2LQ9H987 977 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 POLMQ9NP87 494 aaPredicted RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF232Q9UNY5 417 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 EXOGQ9Y2C4 368 aaKnown RBP15□□□□□ -0.01
CHMP1A-202ENST00000535997 N6AMT1Q9Y5N5 214 aa15□□□□□ -0.01
CHMP1A-202ENST00000535997 TBC1D3KA0A087X1G2 549 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 MEIOCA2RUB1 952 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TBC1D3FA6NER0 549 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 KLF4O43474 513 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 CHST10O43529 356 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 RNGTTO60942 597 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 HLA-DPB1P04440 258 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 APODP05090 189 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TRAPPC2P0DI81 140 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TRAPPC2BP0DI82 140 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 GNSP15586 552 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TBC1D3GQ6DHY5 549 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC30A6Q6NXT4 461 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 MBOAT2Q6ZWT7 520 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 GET4Q7L5D6 327 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SAMD14Q8IZD0 417 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 CAPSLQ8WWF8 208 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SNX18Q96RF0 628 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 PHOX2BQ99453 314 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 MCHR1Q99705 422 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TP63Q9H3D4 680 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 TOR4AQ9NXH8 423 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 A0A1W2PQU0 124 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 ISM1B1AKI9 464 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 RGS13O14921 159 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 ZIC2O95409 532 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 HMGN1P05114 100 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 DDOSTP39656 456 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 PDX1P52945 283 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC35F1Q5T1Q4 408 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 ATAD3CQ5T2N8 411 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 PLEKHM3Q6ZWE6 761 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 GDF7Q7Z4P5 450 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 CAMKK1Q8N5S9 505 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC16A11Q8NCK7 471 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 GAL3ST3Q96A11 431 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SCARF2Q96GP6 870 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SLC41A3Q96GZ6 507 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 C10orf90Q96M02 699 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 APOOQ9BUR5 198 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 C1QTNF7Q9BXJ2 289 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 SFXN1Q9H9B4 322 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 CLCA2Q9UQC9 943 aa14.99□□□□□ -0.01
CHMP1A-202ENST00000535997 CCDC182A6NF36 153 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 HMX3A6NHT5 357 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 AKAP8O43823 692 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 HTR1FP30939 366 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 RPS15AP62244 130 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 PPP3R1P63098 170 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 HOXC5Q00444 222 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 TAB1Q15750 504 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 C6orf132Q5T0Z8 1188 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 MFSD12Q6NUT3 480 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 CDC73Q6P1J9 531 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 SHFQ7M4L6 423 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 AMIGO1Q86WK6 493 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 NRMQ8IXM6 262 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 RDH10Q8IZV5 341 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 LRRC25Q8N386 305 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 ARIH2OSQ8N7S6 290 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 SYT14Q8NB59 555 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 KCT2Q8NC54 265 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 MS4A4EQ96PG1 132 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 ZNF649Q9BS31 505 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 H2AFY2Q9P0M6 372 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 CDH23Q9H251 3354 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 C2orf16Q68DN1 1984 aa14.98□□□□□ -0.01
CHMP1A-202ENST00000535997 LINC00854A0A1B0GVQ3 168 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 PRR23AA6NEV1 266 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 CASKO14936 926 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 CH25HO95992 272 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 IGHA1P01876 353 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 THY1P04216 161 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 S100A1P23297 94 aa14.97□□□□□ -0.01
CHMP1A-202ENST00000535997 DAB2P98082 770 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms