RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CLCA1A8K7I4 914 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 SLC28A1O00337 649 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 HCRTR2O43614 444 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 TBX19O60806 448 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 GOSR1O95249 250 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 EPXP11678 715 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 DGKQP52824 942 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 ART1P52961 327 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 IST1P53990 364 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 GAB1Q13480 694 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 DECR1Q16698 335 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 OR5M10Q6IEU7 315 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 CDC26Q8NHZ8 85 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 HOXB13Q92826 284 aaPredicted RBP17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 SFXN2Q96NB2 322 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 FOXC2Q99958 501 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 L2HGDHQ9H9P8 463 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 Q9N2J8 555 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 SDHAF3Q9NRP4 125 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 C1orf109Q9NX04 203 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 MKS1Q9NXB0 559 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 MID2Q9UJV3 735 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 DKKL1Q9UK85 242 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 FREM3P0C091 2139 aa17.06■□□□□ 0.32
NDUFS3-213ENST00000534716 TUBAL3A6NHL2 446 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 RGS14O43566 566 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 SEC22BO75396 215 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 IL33O95760 270 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 TACR1P25103 407 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 MAP3K8P41279 467 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 STARP49675 285 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 AGFG1P52594 562 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 SRYQ05066 204 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 FOXF2Q12947 444 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 GANABQ14697 944 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 ZNHIT3Q15649 155 aaPredicted RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 CLEC6AQ6EIG7 209 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 Q6ZSR9 355 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 CCDC63Q8NA47 563 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 OR4K17Q8NGC6 315 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 EPS8L3Q8TE67 593 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 EGLN2Q96KS0 407 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 C12orf65Q9H3J6 166 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 PIGMQ9H3S5 423 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 LRTM1Q9HBL6 345 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 FAM120CQ9NX05 1096 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 NTMQ9P121 344 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 ST6GALNAC2Q9UJ37 374 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 MRTO4Q9UKD2 239 aaKnown RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 EDARQ9UNE0 448 aa17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
NDUFS3-213ENST00000534716 EEF1E1-BLOC1S5C9J1V9 151 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 LINC01387J3KSC0 135 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 AZIN1O14977 448 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 EEF1E1O43324 174 aaKnown RBP17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 CRHP06850 196 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 NEFHP12036 1026 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 PCYT1AP49585 367 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 PSMD4P55036 377 aaKnown RBP17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 PCLAFQ15004 111 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 C10orf107Q8IVU9 208 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 OR2M3Q8NG83 312 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 GOT1L1Q8NHS2 421 aaPredicted RBP17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 RMND5BQ96G75 393 aaPredicted RBP17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 CCT7Q99832 543 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 PPP4R1LQ9P1A2 415 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 TMED5Q9Y3A6 229 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 KIAA1549Q9HCM3 1950 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 ITPR3Q14573 2671 aa17.04■□□□□ 0.32
NDUFS3-213ENST00000534716 IGLV3-32A0A0A0MS00 114 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 C17orf51A8MQB3 221 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 TRIM13O60858 407 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 FGF4P08620 206 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 PEPDP12955 493 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 FRKP42685 505 aaPredicted RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 PDE7AQ13946 482 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 GLYR1Q49A26 553 aaPredicted RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 KANK2Q63ZY3 851 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 C4orf33Q8N1A6 199 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 OR2T11Q8NH01 316 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 INTS12Q96CB8 462 aaKnown RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 GATA5Q9BWX5 397 aaPredicted RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 RBM24Q9BX46 236 aaKnown RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 RTN4RQ9BZR6 473 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 DSN1Q9H410 356 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 TUBB1Q9H4B7 451 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 C3orf14Q9HBI5 128 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 RPH3AQ9Y2J0 694 aaPredicted RBP17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 PTGDR2Q9Y5Y4 395 aa17.03■□□□□ 0.32
NDUFS3-213ENST00000534716 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 SMIM23A6NLE4 172 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 A8MXE2 369 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 PDPK1O15530 556 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 TNFSF13O75888 250 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 PRPS2P11908 318 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 SDC1P18827 310 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 CLK3P49761 638 aaKnown RBP17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 PRR5P85299 388 aa17.02■□□□□ 0.32
NDUFS3-213ENST00000534716 OCRLQ01968 901 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms