RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	GSR	P00390	522 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RLN1	P04808	185 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	INHBA	P08476	426 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CXCL8	P10145	99 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	HNF1A	P20823	631 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SLC39A14	Q15043	492 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NPTX1	Q15818	432 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	FAM189A2	Q15884	450 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ELFN2	Q5R3F8	820 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IRAK1BP1	Q5VVH5	260 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	C9orf57	Q5W0N0	161 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	C11orf63	Q6NUN7	778 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	C16orf82	Q7Z2V1	217 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	NRARP	Q7Z6K4	114 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TMEM139	Q8IV31	216 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	UNC45B	Q8IWX7	931 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	APCDD1	Q8J025	514 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PPFIBP2	Q8ND30	876 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CCDC12	Q8WUD4	166 aa	Predicted RBP	3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	RIT1	Q92963	219 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	BSCL2	Q96G97	398 aa	Predicted RBP	3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	PKMYT1	Q99640	499 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TMEM204	Q9BSN7	226 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	KRTAP4-7	Q9BYR0	210 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	APOBEC3G	Q9HC16	384 aa	Known RBP	3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	A4GALT	Q9NPC4	353 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	ABCB8	Q9NUT2	735 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	CNIH4	Q9P003	139 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	DAPK2	Q9UIK4	370 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	LEF1	Q9UJU2	399 aa	Predicted RBP	3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	SCN1A	P35498	2009 aa		3.97	□□□□□ -1.77
ECHDC1-223	ENST00000534442	IGHV1OR21-1	A0A087WYE8	117 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SAA2-SAA4	A0A096LPE2	208 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442		A0A1W2PPI3	338 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PLOD2	O00469	737 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	FPGT	O14772	594 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ZW10	O43264	779 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SMAD6	O43541	496 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KIAA0513	O60268	411 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	NME6	O75414	186 aa	Predicted RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SLITRK3	O94933	977 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PGLS	O95336	258 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TDP2	O95551	362 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CLTA	P09496	248 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SPP1	P10451	314 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	MX1	P20591	662 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	HSD17B3	P37058	310 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	HNF4A	P41235	474 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TAF6	P49848	677 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ALDH3A2	P51648	485 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ADAR	P55265	1226 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	B3GALT5-AS1	P59052	145 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	NANOS2	P60321	138 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PFN3	P60673	137 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ST8SIA6	P61647	398 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	EEF1A2	Q05639	463 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KIR2DS3	Q14952	304 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SMU1	Q2TAY7	513 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	ODF2	Q5BJF6	829 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	DMRTC1	Q5HYR2	192 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LRRC73	Q5JTD7	316 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CYB5D1	Q6P9G0	228 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	WDR59	Q6PJI9	974 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CORO6	Q6QEF8	472 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	UNQ6126/PRO20091	Q6UXV3	157 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TUBA1A	Q71U36	451 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	NUDT13	Q86X67	352 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	C10orf53	Q8N6V4	93 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	OR7G3	Q8NG95	312 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	OR11H4	Q8NGC9	324 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	NCOA7	Q8NI08	942 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CCDC107	Q8WV48	283 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PROX1	Q92786	737 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	THOC1	Q96FV9	657 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	CABS1	Q96KC9	395 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	IFT74	Q96LB3	600 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TUBA1C	Q9BQE3	449 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TM6SF1	Q9BZW5	370 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	DDX31	Q9H8H2	851 aa	Known RBP	3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TUFT1	Q9NNX1	390 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TCF7L2	Q9NQB0	619 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	OLFML3	Q9NRN5	406 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	GGA2	Q9UJY4	613 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	JRKL	Q9Y4A0	524 aa		3.96	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TRAV24	A0A0B4J272	114 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442		A0A1W2PPW3	197 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LRRD1	A4D1F6	860 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SMTNL1	A8MU46	457 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	LACTBL1	A8MY62	500 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	KPNA7	A9QM74	516 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PRAC2	D3DTV9	90 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442		F8VP50	259 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442		O00370	1275 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	SPAG6	O75602	509 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	TOM1L1	O75674	476 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	BAG2	O95816	211 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	BMP15	O95972	392 aa		3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	PAK4	O96013	591 aa	Predicted RBP	3.95	□□□□□ -1.78
ECHDC1-223	ENST00000534442	IGHV4-39	P01824	125 aa		3.95	□□□□□ -1.78

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