RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 RFX3P48380 749 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 CLDN18P56856 261 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 RIPPLY3P57055 190 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 SLC18A2Q05940 514 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 BCL2A1Q16548 175 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 LIPMQ5VYY2 423 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 FBXW10Q5XX13 1052 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 Q6ZSR9 355 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 IKBIPQ70UQ0 350 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 CHMP1BQ7LBR1 199 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 ZNF551Q7Z340 670 aaPredicted RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 LUZP2Q86TE4 346 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 CDC20BQ86Y33 519 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 C10orf107Q8IVU9 208 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 GCNT2Q8N0V5 402 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 C4orf33Q8N1A6 199 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 DUSP19Q8WTR2 217 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 GFM2Q969S9 779 aaKnown RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 TRIM44Q96DX7 344 aaPredicted RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 RMND5BQ96G75 393 aaPredicted RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 SFXN3Q9BWM7 321 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 RBM24Q9BX46 236 aaKnown RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 ACBD3Q9H3P7 528 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 LRTM1Q9HBL6 345 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 Q9N2J8 555 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 C1orf109Q9NX04 203 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 MED11Q9P086 117 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 ST6GALNAC2Q9UJ37 374 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 MRTO4Q9UKD2 239 aaKnown RBP8.07□□□□□ -1.12
COPB1-211ENST00000534234 EDARQ9UNE0 448 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 FIS1Q9Y3D6 152 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 EML6Q6ZMW3 1958 aa8.07□□□□□ -1.12
COPB1-211ENST00000534234 PHF3Q92576 2039 aaKnown RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 TLDC2A0PJX2 215 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 NPIPB8E9PQR5 432 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 AZIN1O14977 448 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 TRIM13O60858 407 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 PSMG1O95456 288 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 IL33O95760 270 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 TGM6O95932 706 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 LINC00032P0C843 101 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 PEPDP12955 493 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 PRPH2P23942 346 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 GABRA3P34903 492 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 CLK3P49761 638 aaKnown RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 PSMD4P55036 377 aaKnown RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 B3GALT5-AS1P59052 145 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 EEF1A1P68104 462 aaKnown RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 SORDQ00796 357 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 STX5Q13190 355 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 RFTN2Q52LD8 501 aaPredicted RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 EEF1A1P5Q5VTE0 462 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 MARCH3Q86UD3 253 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 GRAMD2AQ8IUY3 354 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 UBQLNLQ8IYU4 475 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 FADS6Q8N9I5 356 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 OR2M3Q8NG83 312 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.06□□□□□ -1.12
COPB1-211ENST00000534234 NINJ1Q92982 152 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 FOXC2Q99958 501 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 GATA5Q9BWX5 397 aaPredicted RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 PTGES2Q9H7Z7 377 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 C3orf14Q9HBI5 128 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 FAM120CQ9NX05 1096 aaKnown RBP8.06□□□□□ -1.12
COPB1-211ENST00000534234 FLRT3Q9NZU0 649 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 SH3BP4Q9P0V3 963 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 CLCF1Q9UBD9 225 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 BAIAP2L1Q9UHR4 511 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 MID2Q9UJV3 735 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 ABCG2Q9UNQ0 655 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 ZNF337Q9Y3M9 751 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 PTGDR2Q9Y5Y4 395 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 HIVEP1P15822 2718 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 F8P00451 2351 aa8.06□□□□□ -1.12
COPB1-211ENST00000534234 TTC36A6NLP5 189 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 A8MXE2 369 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PDPK1O15530 556 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 AKAP10O43572 662 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 KCNH1O95259 989 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CHEK2O96017 543 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PRPS2P11908 318 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 HK1P19367 917 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 DNASE1P24855 282 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 GPC1P35052 558 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CPA2P48052 419 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PRKAG1P54619 331 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 MANFP55145 182 aaKnown RBP8.05□□□□□ -1.12
COPB1-211ENST00000534234 HSPB3Q12988 150 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 PCLAFQ15004 111 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 RAET1LQ5VY80 246 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 ANKRD26P1Q6NSI1 321 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 P4HA3Q7Z4N8 544 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 EXOC3L1Q86VI1 746 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 OR2T11Q8NH01 316 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CEP70Q8NHQ1 597 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 GPR151Q8TDV0 419 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 TSSK3Q96PN8 268 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 CCT7Q99832 543 aa8.05□□□□□ -1.12
COPB1-211ENST00000534234 LMF2Q9BU23 707 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms