RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LIMS3P0CW19 117 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 LIMS4P0CW20 117 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 GNSP15586 552 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 VIPR2P41587 438 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 CTBP2P56545 445 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 GPR85P60893 370 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 NOGQ13253 232 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 PIP5KL1Q5T9C9 394 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 SLC27A4Q6P1M0 643 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF793Q6ZN11 406 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 NRSN1Q8IZ57 195 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 MORN4Q8NDC4 146 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 OR4M2Q8NGB6 313 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 RGMAQ96B86 450 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 RIPOR3Q96MK2 946 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 FUZQ9BT04 418 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 B3GAT2Q9NPZ5 323 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 CSNK1G3Q9Y6M4 447 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 OR5K4A6NMS3 321 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 TOR1AO14656 332 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 HRO43593 1189 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ADRB3P13945 408 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ITGB8P26012 769 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 FUT5Q11128 374 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ARHGAP15Q53QZ3 475 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 LURAP1LQ8IV03 231 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 YIPF7Q8N8F6 280 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 ZBTB44Q8NCP5 570 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 MSLNLQ96KJ4 702 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 IER2Q9BTL4 223 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 BRD7Q9NPI1 651 aa18.15■□□□□ 0.5
CAPN1-226ENST00000533820 RAB8AP61006 207 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 GRM7Q14831 915 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF77Q15935 545 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 BTBD16Q32M84 506 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 KLHL22Q53GT1 634 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 LCN1P1Q5VSP4 162 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 FAM46CQ5VWP2 391 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 TMEM65Q6PI78 240 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 WACQ9BTA9 647 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 GON7Q9BXV9 100 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 IMP3Q9NV31 184 aaKnown RBP18.14■□□□□ 0.5
CAPN1-226ENST00000533820 SLC13A4Q9UKG4 626 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 ACAD8Q9UKU7 415 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 GSTK1Q9Y2Q3 226 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 OR1A2Q9Y585 309 aa18.14■□□□□ 0.5
CAPN1-226ENST00000533820 NUPL2O15504 423 aaKnown RBP18.14■□□□□ 0.49
CAPN1-226ENST00000533820 INPP1P49441 399 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 CDH11P55287 796 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 CDK5Q00535 292 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 C18orf63Q68DL7 685 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 CLDN22Q8N7P3 220 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 LINC01555Q8NAE3 123 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 TRAF4Q9BUZ4 470 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-226ENST00000533820 DPEP2Q9H4A9 486 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 EPHX3Q9H6B9 360 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 FAM240BA0A1B0GVZ2 78 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 ZC3H12DA2A288 527 aaKnown RBP18.14■□□□□ 0.49
CAPN1-226ENST00000533820 FGBP02675 491 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 ACP2P11117 423 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 GAS1P54826 345 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 C9orf64Q5T6V5 341 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF57Q68EA5 555 aaPredicted RBP18.14■□□□□ 0.49
CAPN1-226ENST00000533820 IL20RBQ6UXL0 311 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 SLC39A5Q6ZMH5 540 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 GDPD1Q8N9F7 314 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 TMEM163Q8TC26 289 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 KAT2AQ92830 837 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 CAPNS2Q96L46 248 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 IFT22Q9H7X7 185 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 SEMA4GQ9NTN9 838 aa18.14■□□□□ 0.49
CAPN1-226ENST00000533820 SF3B6Q9Y3B4 125 aaKnown RBP18.14■□□□□ 0.49
CAPN1-226ENST00000533820 SNRNP200O75643 2136 aaKnown RBP18.13■□□□□ 0.49
CAPN1-226ENST00000533820 PRODHO43272 600 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ERI3O43414 337 aaKnown RBP18.13■□□□□ 0.49
CAPN1-226ENST00000533820 PRNPP04156 253 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 MAP2K3P46734 347 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 CLDN2P57739 230 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF311Q5JNZ3 666 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 OR4C11Q6IEV9 310 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 SLC36A4Q6YBV0 504 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF557Q8N988 423 aaPredicted RBP18.13■□□□□ 0.49
CAPN1-226ENST00000533820 NEIL3Q8TAT5 605 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 AICDAQ9GZX7 198 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ALG5Q9Y673 324 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 C4orf51C9J302 202 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 HAAOP46952 286 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 LRRC32Q14392 662 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 C1orf94Q6P1W5 598 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF600Q6ZNG1 722 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 NKAIN4Q8IVV8 208 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 RDH10Q8IZV5 341 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 COL26A1Q96A83 441 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 GMEB2Q9UKD1 530 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 ATG4BQ9Y4P1 393 aa18.13■□□□□ 0.49
CAPN1-226ENST00000533820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.12■□□□□ 0.49
CAPN1-226ENST00000533820 ISM1B1AKI9 464 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 ADH5P11766 374 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 ACP5P13686 325 aa18.12■□□□□ 0.49
CAPN1-226ENST00000533820 WASP42768 502 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms