RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CHID1Q9BWS9 393 aa10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 VN1R1Q9GZP7 353 aa10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 GPN2Q9H9Y4 310 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 PNO1Q9NRX1 252 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 ZNF639Q9UID6 485 aa10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 FARSAQ9Y285 508 aaKnown RBP10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 HEMK1Q9Y5R4 338 aaPredicted RBP10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 FER1L5A0AVI2 2057 aa10.16□□□□□ -0.78
CCDC90B-218ENST00000533761 A0A1W2PS29 197 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 VSTM2BA6NLU5 285 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 IDSB3KWA1 339 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 GNGT2O14610 69 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 RRP8O43159 456 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 STX11O75558 287 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 JRKO75564 520 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 IGHEP01854 428 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 FABP3P05413 133 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 ATP6V1C1P21283 382 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 EMP2P54851 167 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 PSMD4P55036 377 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 EEF1A2Q05639 463 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 DNASE1L3Q13609 305 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 NKG7Q16617 165 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 ARHGAP11BQ3KRB8 267 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 IFI44LQ53G44 452 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 HLA-DQA1Q5Y7H0 255 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 UNQ6494/PRO21346Q6UXR6 183 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 RNF111Q6ZNA4 994 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 COX15Q7KZN9 410 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 PEX5LQ8IYB4 626 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 EME1Q96AY2 570 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 CENPNQ96H22 339 aaPredicted RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 TPD52L3Q96J77 140 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 LMF2Q9BU23 707 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 CRB3Q9BUF7 120 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 OR10A5Q9H207 317 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 IL1RAPQ9NPH3 570 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 NECTIN3Q9NQS3 549 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 KLHL28Q9NXS3 571 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 TCFL5Q9UL49 500 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 ZNF232Q9UNY5 417 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 ERVK-19Q9WJR5 959 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 SLC9A8Q9Y2E8 581 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 IFT52Q9Y366 437 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 FAM32AQ9Y421 112 aaKnown RBP10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 PCDHGA6Q9Y5G7 932 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 V9GYQ6 96 aa10.15□□□□□ -0.78
CCDC90B-218ENST00000533761 NUP210LQ5VU65 1888 aa10.15□□□□□ -0.79
CCDC90B-218ENST00000533761 LOC101059948A0A1B0GTJ6 334 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 M0QX08 132 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 KLK10O43240 276 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ALOX12BO75342 701 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 KLF7O75840 302 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CBX7O95931 251 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ALPPP05187 535 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 GUSBP08236 651 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 IFNA8P32881 189 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 FOLR3P41439 243 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 MAN2A2P49641 1150 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 RNF144AP50876 292 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 POU6F2P78424 691 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 MGAT2Q10469 447 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CLN3Q13286 438 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 GK3PQ14409 553 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 LARS2Q15031 903 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ATP6AP1Q15904 470 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ZSWIM7Q19AV6 140 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 EIPR1Q53HC9 387 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 HEPHL1Q6MZM0 1159 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC29A4Q7RTT9 530 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CYP4Z1Q86W10 505 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 PRSS58Q8IYP2 241 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SLC16A11Q8NCK7 471 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 OR2Y1Q8NGV0 311 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 OIT3Q8WWZ8 545 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 NACC2Q96BF6 587 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 SENP5Q96HI0 755 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 NAF1Q96HR8 494 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 HSH2DQ96JZ2 352 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ZNF347Q96SE7 839 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 LPAR4Q99677 370 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 OSBPL10Q9BXB5 764 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 OR8D2Q9GZM6 311 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 EVA1AQ9H8M9 152 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 MTHFD2LQ9H903 347 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 AGPAT4Q9NRZ5 378 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 DNAJB9Q9UBS3 223 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 NKX1-2Q9UD57 310 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 C3orf18Q9UK00 162 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 PTRH2Q9Y3E5 179 aaKnown RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 WDR45Q9Y484 360 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 OR10H1Q9Y4A9 318 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ACACAQ13085 2346 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 TMEM8BA6NDV4 472 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 A8MVJ9 347 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CASQ2O14958 399 aaPredicted RBP10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 ADAMDEC1O15204 470 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 CLOCKO15516 846 aa10.14□□□□□ -0.79
CCDC90B-218ENST00000533761 TLX3O43711 291 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms