RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 TNFSF13O75888 250 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 SMNDC1O75940 238 aaKnown RBP eCLIP20.68■□□□□ 0.99e-6■■■■□ 21.6
PKP3-210ENST00000533249 HOXC12P31275 282 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 ACSM2AQ08AH3 577 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 ZNF678Q5SXM1 525 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 ACSM2BQ68CK6 577 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 Q71RC1 249 aaPredicted RBP20.68■□□□□ 0.9
PKP3-210ENST00000533249 UBQLNLQ8IYU4 475 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 SAMD14Q8IZD0 417 aaPredicted RBP20.68■□□□□ 0.9
PKP3-210ENST00000533249 OR4N2Q8NGD1 307 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 C16orf78Q8WTQ4 265 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 SMPDL3BQ92485 455 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 MTBPQ96DY7 904 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 APIPQ96GX9 242 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 TMEM237Q96Q45 408 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 ZNF382Q96SR6 550 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 EBPLQ9BY08 206 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 STMN4Q9H169 189 aaPredicted RBP20.68■□□□□ 0.9
PKP3-210ENST00000533249 SLC35C2Q9NQQ7 365 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 TMEM216Q9P0N5 145 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 OR10H1Q9Y4A9 318 aa20.68■□□□□ 0.9
PKP3-210ENST00000533249 B4DXG7 233 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 HCRTR2O43614 444 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 SCO2O43819 266 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 PNLIPRP2P54317 469 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 EEF1A1P68104 462 aaKnown RBP20.67■□□□□ 0.9
PKP3-210ENST00000533249 BTKQ06187 659 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 HEPACAMQ14CZ8 416 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 SH2D4BQ5SQS7 431 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 EEF1A1P5Q5VTE0 462 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 CHMP1BQ7LBR1 199 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 FAM9CQ8IZT9 166 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 GBP7Q8N8V2 638 aaPredicted RBP20.67■□□□□ 0.9
PKP3-210ENST00000533249 OR7G2Q8NG99 324 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 BEX4Q9NWD9 120 aaPredicted RBP20.67■□□□□ 0.9
PKP3-210ENST00000533249 ZNF446Q9NWS9 450 aa20.67■□□□□ 0.9
PKP3-210ENST00000533249 MRPS18CQ9Y3D5 142 aaKnown RBP20.67■□□□□ 0.9
PKP3-210ENST00000533249 DLX3O60479 287 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 GCAP28676 217 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 TIA1P31483 386 aaKnown RBP eCLIP20.66■□□□□ 0.9
PKP3-210ENST00000533249 GAS1P54826 345 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 B3GALT5-AS1P59052 145 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 NKX6-1P78426 367 aaPredicted RBP20.66■□□□□ 0.9
PKP3-210ENST00000533249 ZNF155Q12901 538 aaPredicted RBP20.66■□□□□ 0.9
PKP3-210ENST00000533249 SPIN4Q56A73 249 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 BIVMQ86UB2 503 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 CNEP1R1Q8N9A8 125 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 CDC26Q8NHZ8 85 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 RNF138Q8WVD3 245 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 C18orf12Q96KH6 178 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 BBS4Q96RK4 519 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 DSN1Q9H410 356 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 TAS2R9Q9NYW1 312 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 PPP4R1LQ9P1A2 415 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 TESMINQ9Y4I5 508 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 TIMM22Q9Y584 194 aa20.66■□□□□ 0.9
PKP3-210ENST00000533249 SLC22A20A6NK97 555 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 MSTNO14793 375 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 PLOD3O60568 738 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 ADSLP30566 484 aaPredicted RBP20.65■□□□□ 0.9
PKP3-210ENST00000533249 MPIP34949 423 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 DSCR4P56555 118 aaPredicted RBP20.65■□□□□ 0.9
PKP3-210ENST00000533249 PSPHP78330 225 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 MRPS22P82650 360 aaKnown RBP20.65■□□□□ 0.9
PKP3-210ENST00000533249 LTBQ06643 244 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 FAM27E3Q08E93 113 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 VWA1Q6PCB0 445 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 KRTAP1-3Q8IUG1 177 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 PKNOX2Q96KN3 472 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 FAM111AQ96PZ2 611 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 KCNA7Q96RP8 456 aa20.65■□□□□ 0.9
PKP3-210ENST00000533249 C6orf203Q9P0P8 240 aaPredicted RBP20.65■□□□□ 0.9
PKP3-210ENST00000533249 ANXA4P09525 319 aaPredicted RBP20.64■□□□□ 0.89
PKP3-210ENST00000533249 PEPDP12955 493 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 EVI2BP34910 448 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 SIRPAP78324 504 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 STX5Q13190 355 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 BCL2A1Q16548 175 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 HSP90B2PQ58FF3 399 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 RAET1LQ5VY80 246 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 OR2A2Q6IF42 318 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 STARD4Q96DR4 205 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 KLHL28Q9NXS3 571 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 LGALS13Q9UHV8 139 aa20.64■□□□□ 0.89
PKP3-210ENST00000533249 H0YC42 278 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 SASH3O75995 380 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 JUNP05412 331 aaKnown RBP20.63■□□□□ 0.89
PKP3-210ENST00000533249 CRHP06850 196 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 INHBBP09529 407 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 HK1P19367 917 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 IMPDH1P20839 514 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 ATP5F1P24539 256 aaPredicted RBP20.63■□□□□ 0.89
PKP3-210ENST00000533249 TPD52P55327 224 aaPredicted RBP20.63■□□□□ 0.89
PKP3-210ENST00000533249 PSG6Q00889 435 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 SPDYAQ5MJ70 313 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 BTLAQ7Z6A9 289 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 CXorf67Q86X51 503 aaPredicted RBP20.63■□□□□ 0.89
PKP3-210ENST00000533249 MEIOBQ8N635 442 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 FADS6Q8N9I5 356 aa20.63■□□□□ 0.89
PKP3-210ENST00000533249 OR2M3Q8NG83 312 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms