RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MAB21L2Q9Y586 359 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 BZW2Q9Y6E2 419 aaKnown RBP2.98□□□□□ -1.93
PTPRK-220ENST00000531466 KIF27Q86VH2 1401 aa2.98□□□□□ -1.93
PTPRK-220ENST00000531466 ACEP12821 1306 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 POGZQ7Z3K3 1410 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 A0A087WV48 116 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 A0A0U1RQS6 177 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 GSAPA4D1B5 854 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ARHGEF33A8MVX0 844 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 GOLGA8KD6RF30 607 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 AIM2O14862 343 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ALOX15BO15296 676 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PPIP5K2O43314 1243 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 DENRO43583 198 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TRAPPC3O43617 180 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ECE2O60344 883 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RPP14O95059 124 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PDGFBP01127 241 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PENKP01210 267 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CRYGCP07315 174 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SERPINF2P08697 491 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RPS17P08708 135 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 UBTFL1P0CB47 393 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PNMA6AP0CW24 399 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC166P0CW27 439 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CALCBP10092 127 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 UMPSP11172 480 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MSR1P21757 451 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 AHCYP23526 432 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 YWHABP31946 246 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MC5RP33032 325 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CTNNB1P35222 781 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SYKP43405 635 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CRKLP46109 303 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SLC1A6P48664 564 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 NPY4RP50391 375 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SLC7A2P52569 658 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 METAP1P53582 386 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CDH13P55290 713 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 NME5P56597 212 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RAB4BP61018 213 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CBX1P83916 185 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 HSPB3Q12988 150 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 LCP2Q13094 533 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CUL3Q13618 768 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TPD52L1Q16890 204 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF829Q3KNS6 432 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 NADK2Q4G0N4 442 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 DNAL1Q4LDG9 190 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM31Q5JXX7 168 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 BEND6Q5SZJ8 279 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ARMC12Q5T9G4 340 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CARD17Q5XLA6 110 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RAET1GQ6H3X3 334 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM211Q6ICI0 200 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CYB5D1Q6P9G0 228 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TTC23LQ6PF05 361 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SYVN1Q86TM6 617 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SERINC5Q86VE9 423 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 KLHL7Q8IXQ5 586 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CLYBLQ8N0X4 340 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 BATF2Q8N1L9 274 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 COMMD1Q8N668 190 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CEP112Q8N8E3 955 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 IQUBQ8NA54 791 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MINDY2Q8NBR6 621 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC112Q8NEF3 446 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF680Q8NEM1 530 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 STEAP2Q8NFT2 490 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 OR10Q1Q8NGQ4 319 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ANGPTL6Q8NI99 470 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CD300LFQ8TDQ1 290 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ST7LQ8TDW4 575 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 IFT81Q8WYA0 676 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CORO2AQ92828 525 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ESAMQ96AP7 390 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MRPL38Q96DV4 380 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 FAM122AQ96E09 287 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC51Q96ER9 411 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 LINC00615Q96LM1 132 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SAMD8Q96LT4 415 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 SLC29A1Q99808 456 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 JPH2Q9BR39 696 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ZSCAN5AQ9BUG6 496 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 FRMD8P1Q9BZ68 369 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RAB17Q9H0T7 212 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MTIF3Q9H2K0 278 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 GOLPH3LQ9H4A5 285 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 ST6GALNAC4Q9H4F1 302 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MRPL40Q9NQ50 206 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PRMT7Q9NVM4 692 aaPredicted RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 PEF1Q9UBV8 284 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 DNPEPQ9ULA0 475 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 TMCO1Q9UM00 188 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 RUVBL2Q9Y230 463 aaKnown RBP2.97□□□□□ -1.93
PTPRK-220ENST00000531466 AP4B1Q9Y6B7 739 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 MAP3K5Q99683 1374 aa2.97□□□□□ -1.93
PTPRK-220ENST00000531466 A0A087WZY1 265 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 TRBV2A0A0J9YWF9 115 aa2.96□□□□□ -1.94
PTPRK-220ENST00000531466 A0A0J9YYE9 177 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms