RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 STX5Q13190 355 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 RASA2Q15283 850 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 BCL2A1Q16548 175 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 PRSS53Q2L4Q9 553 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF678Q5SXM1 525 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 RAET1LQ5VY80 246 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 OR2A2Q6IF42 318 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 GPRIN3Q6ZVF9 776 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF550Q7Z398 422 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 FAM9CQ8IZT9 166 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 GBP7Q8N8V2 638 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 FADS6Q8N9I5 356 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 OR2M3Q8NG83 312 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 DTNBP1Q96EV8 351 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 ZC3HAV1LQ96H79 300 aaKnown RBP16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 Q96MF0 132 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 TMEM237Q96Q45 408 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 HS3ST6Q96QI5 342 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 PIGQQ9BRB3 760 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 PINK1Q9BXM7 581 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 RTN4RQ9BZR6 473 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 SLC35C2Q9NQQ7 365 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 GIMAP4Q9NUV9 329 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 MED11Q9P086 117 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF337Q9Y3M9 751 aa16.62■□□□□ 0.25
SSSCA1-206ENST00000531405 H7C1Q1 480 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 PLOD3O60568 738 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 ULK1O75385 1050 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 POU2F1P14859 743 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 CRYGSP22914 178 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 HMOX2P30519 316 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 TIA1P31483 386 aaKnown RBP eCLIP16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 UGT2B10P36537 528 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 PSG6Q00889 435 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 ACSM2AQ08AH3 577 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 ACSM2BQ68CK6 577 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 MEIOBQ8N635 442 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 CDC26Q8NHZ8 85 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 METTL6Q8TCB7 284 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 COX4I2Q96KJ9 171 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 BBS4Q96RK4 519 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 KCNA7Q96RP8 456 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF382Q96SR6 550 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 CCL19Q99731 98 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF226Q9NYT6 803 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 TAS2R9Q9NYW1 312 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 TMEM216Q9P0N5 145 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 DMGDHQ9UI17 866 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 TIMM22Q9Y584 194 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 USF3Q68DE3 2245 aa16.61■□□□□ 0.25
SSSCA1-206ENST00000531405 H3BML4 177 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 SMAD7O15105 426 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 FADS1O60427 444 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 DLX3O60479 287 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 JUNP05412 331 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 KCNJ5P48544 419 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 CLDN20P56880 219 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 CKAP4Q07065 602 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 HEPACAMQ14CZ8 416 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 ACKR1Q16570 336 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 SPIN4Q56A73 249 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 C22orf34Q6ZV56 151 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 SAMD14Q8IZD0 417 aaPredicted RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 LRRC75A-AS1Q8N1F1 130 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 FNDC9Q8TBE3 224 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 IFT81Q8WYA0 676 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 ANP32BQ92688 251 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 PIGTQ969N2 578 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 PERPQ96FX8 193 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF845Q96IR2 970 aaPredicted RBP16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 PIP5K1AQ99755 562 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF180Q9UJW8 692 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 HIVEP2P31629 2446 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 RTTNQ86VV8 2226 aa16.6■□□□□ 0.25
SSSCA1-206ENST00000531405 OR2M5A3KFT3 312 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 CGAP01215 116 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 ANXA4P09525 319 aaPredicted RBP16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 MPIP34949 423 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 PSPHP78330 225 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 MRPS22P82650 360 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 ANKRD34AQ69YU3 496 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 TMEM107Q6UX40 140 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 YTHDF3Q7Z739 585 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 ZNF610Q8N9Z0 462 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 C11orf24Q96F05 449 aaPredicted RBP16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 MARK4Q96L34 752 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 FMO2Q99518 471 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 RNF122Q9H9V4 155 aa16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.59■□□□□ 0.25
SSSCA1-206ENST00000531405 TRIM64A6NGJ6 449 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 TRIM64BA6NI03 449 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 MYO1GB0I1T2 1018 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 SHISA8B8ZZ34 492 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 C16orf97H3BN30 126 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 EMC8O43402 210 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 GMFGO60234 142 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 TNFRSF21O75509 655 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 SNRPAP09012 282 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 TAC1P20366 129 aa16.58■□□□□ 0.24
SSSCA1-206ENST00000531405 LOXP28300 417 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms