RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 HDAC11Q96DB2 347 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 ELMO2Q96JJ3 720 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 C9orf72Q96LT7 481 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TGM7Q96PF1 710 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TSGA13Q96PP4 275 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 OR6C1Q96RD1 312 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 LITAFQ99732 161 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 ZSCAN5AQ9BUG6 496 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 MLPHQ9BV36 600 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 SPATA16Q9BXB7 569 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 OR2AG1Q9H205 316 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 SEMA6AQ9H2E6 1030 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PLK3Q9H4B4 646 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 UCK1Q9HA47 277 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TRMT1Q9NXH9 659 aaKnown RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 ATXN10Q9UBB4 475 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 TP53TG5Q9Y2B4 290 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 MRPS18BQ9Y676 258 aaKnown RBP6.22□□□□□ -1.41
CSDE1-213ENST00000530784 PIEZO2Q9H5I5 2752 aa6.22□□□□□ -1.41
CSDE1-213ENST00000530784 HECTD1Q9ULT8 2610 aa6.21□□□□□ -1.41
CSDE1-213ENST00000530784 A0A087X0T9 212 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 OR2M5A3KFT3 312 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 KCNK1O00180 336 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 KIAA0754O94854 1291 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 JCHAINP01591 159 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 SERPING1P05155 500 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 KRT7P08729 469 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 FAM228BP0C875 321 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 GP1BBP13224 206 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 XRCC1P18887 633 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 F8A1P23610 371 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 ANP32AP39687 249 aaKnown RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 CAPZBP47756 277 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 LEPRP48357 1165 aaKnown RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 ARSEP51690 589 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 DCDC1P59894 354 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 IFI35P80217 286 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 IL11RAQ14626 422 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 PDPK2PQ6A1A2 396 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 ITPRIPL1Q6GPH6 555 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 KIAA0930Q6ICG6 404 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 CYB5D1Q6P9G0 228 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 CLEC18BQ6UXF7 455 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF534Q76KX8 674 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 PRSS42Q7Z5A4 293 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 TRAM1L1Q8N609 369 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 WDSUB1Q8N9V3 476 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 SYN2Q92777 582 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 GLYATL1Q969I3 302 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 LGALS12Q96DT0 336 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 NAP1L5Q96NT1 182 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 TIMM29Q9BSF4 260 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 RBM4Q9BWF3 364 aaKnown RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 RAD21L1Q9H4I0 556 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 PTTG2Q9NZH5 202 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 OGFRQ9NZT2 677 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 NFKBIL1Q9UBC1 381 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-213ENST00000530784 LNPEPQ9UIQ6 1025 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 SDK2Q58EX2 2172 aa6.21□□□□□ -1.42
CSDE1-213ENST00000530784 MAST4O15021 2626 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 OR52A4PA6NMU1 304 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 C15orf62A8K5M9 175 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 CHUKO15111 745 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 KMOO15229 486 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 VEGFDO43915 354 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 DOK2O60496 412 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 TMCC2O75069 709 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 MTX2O75431 263 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 SPAG6O75602 509 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PROSCO94903 275 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 CDK14O94921 469 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 MT-ND3P03897 115 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PIRTP0C851 137 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF7P17097 686 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 VCLP18206 1134 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 IDSP22304 550 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 CASP14P31944 242 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 NR2C2P49116 596 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 CAMPP49913 170 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 DRG2P55039 364 aaKnown RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 TPM4P67936 248 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PPIDQ08752 370 aaKnown RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 MEP1AQ16819 746 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 NDUFAF5Q5TEU4 345 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 IRGCQ6NXR0 463 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ALKBH5Q6P6C2 394 aaKnown RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ABRAXAS1Q6UWZ7 409 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 RBMS3Q6XE24 437 aaKnown RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 FAM92BQ6ZTR7 304 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PTOV1Q86YD1 416 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 TRAPPC5Q8IUR0 188 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PQLC3Q8N755 202 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 GPR26Q8NDV2 337 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ZNF473Q8WTR7 871 aaKnown RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 FAF2Q96CS3 445 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 CXorf40BQ96DE9 158 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 TRIB3Q96RU7 358 aa6.2□□□□□ -1.42
CSDE1-213ENST00000530784 ZBTB20Q9HC78 741 aaPredicted RBP6.2□□□□□ -1.42
CSDE1-213ENST00000530784 PDE7BQ9NP56 450 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms