RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ENPP4Q9Y6X5 453 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PRICKLE3O43900 615 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 CHRM5P08912 532 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 NR2F1P10589 423 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 POU3F3P20264 500 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 NTSP30990 170 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 XCR1P46094 333 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 DUSP2Q05923 314 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 RGS1Q08116 209 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 MAB21L1Q13394 359 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ABHD17CQ6PCB6 329 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 CDH24Q86UP0 819 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 TRIM48Q8IWZ4 208 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 AQP11Q8NBQ7 271 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 TTLQ8NG68 377 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 GPR32P1Q8NGA4 272 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 GGHQ92820 318 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 BMFQ96LC9 184 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 RSPO3Q9BXY4 272 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 EQTNQ9NQ60 294 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 PRDM7Q9NQW5 492 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 THSD1Q9NS62 852 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 ZNF624Q9P2J8 865 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 ADAM29Q9UKF5 820 aa10.86□□□□□ -0.67
USP35-207ENST00000530546 ELF5Q9UKW6 265 aaPredicted RBP10.86□□□□□ -0.67
USP35-207ENST00000530546 NINQ8N4C6 2090 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TCRBV21S2A2A0A5A6 115 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PRR19A6NJB7 356 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 I3L521 148 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 NDUFA2O43678 99 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 CCNB2O95067 398 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 RECKO95980 971 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ASGR2P07307 311 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TNNI3P19429 210 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ATP5A1P25705 553 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 LIM2P55344 173 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 SNRPD2P62316 118 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 PSPHP78330 225 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 BTN3A2P78410 334 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 LASP1Q14847 261 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 NFATC4Q14934 902 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TAB1Q15750 504 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ZIC1Q15915 447 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TMEM35AQ53FP2 167 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PRRT3Q5FWE3 981 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ZMAT1Q5H9K5 638 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PLEKHM3Q6ZWE6 761 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TBC1D19Q8N5T2 526 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 WDR92Q96MX6 357 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 WFDC6Q9BQY6 131 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 SRMSQ9H3Y6 488 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 UCKL1Q9NWZ5 548 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 SEC14L3Q9UDX4 400 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 AP1M2Q9Y6Q5 423 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PRAMEF27A3QJZ7 478 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TBX19O60806 448 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 AIFM1O95831 613 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 LTBRP36941 435 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PXNP49023 591 aaPredicted RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 RORCP51449 518 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 SNRPNP63162 240 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 ABATP80404 500 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TATDN3Q17R31 274 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 GLYR1Q49A26 553 aaPredicted RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 ZNF542PQ5EBM4 170 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PLET1Q6UQ28 207 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 TMEM107Q6UX40 140 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 OR8H1Q8NGG4 311 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ZCCHC10Q8TBK6 192 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 KIAA1143Q96AT1 154 aaPredicted RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 ZC3HAV1LQ96H79 300 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 PPA2Q9H2U2 334 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 A4GALTQ9NPC4 353 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 CTPS2Q9NRF8 586 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 ASB4Q9Y574 426 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 PCDHGA2Q9Y5H1 932 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 SNRNP200O75643 2136 aaKnown RBP10.85□□□□□ -0.67
USP35-207ENST00000530546 GON4LQ3T8J9 2241 aa10.85□□□□□ -0.67
USP35-207ENST00000530546 IQCMA0A1B0GVH7 501 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 GSAPA4D1B5 854 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 MAN2B1O00754 1011 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 DPM1O60762 260 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 KCNJ13O60928 360 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 PTHP01270 115 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 IFNA16P05015 189 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 ICAM2P13598 275 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 ANXA8P13928 327 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 DRD2P14416 443 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 TPMTP51580 245 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 PER3P56645 1201 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 DAB2P98082 770 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 GALEQ14376 348 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 GDPGP1Q6ZNW5 385 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 GPALPP1Q8IXQ4 340 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 STX19Q8N4C7 294 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 OR2L5Q8NG80 312 aa10.84□□□□□ -0.67
USP35-207ENST00000530546 PATE1Q8WXA2 126 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms