RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 HRNRQ86YZ3 2850 aaPredicted RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 TMEM114B3SHH9 223 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 EEF1E1-BLOC1S5C9J1V9 151 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 LSM1O15116 133 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 EEF1E1O43324 174 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 KCNH1O95259 989 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 MAPK1P28482 360 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 OPRM1P35372 400 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 CLK3P49761 638 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 ZNF136P52737 540 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 DGKQP52824 942 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 GFRA1P56159 465 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 TESK1Q15569 626 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 GALNTL6Q49A17 601 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 SZRD1Q7Z422 152 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 OR4N2Q8NGD1 307 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 OR2T11Q8NH01 316 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 RNASE6Q93091 150 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 MS4A4EQ96PG1 132 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 TSSK3Q96PN8 268 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 TM9SF2Q99805 663 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 SH3GL2Q99962 352 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 ROPN1BQ9BZX4 212 aaPredicted RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 ACBD3Q9H3P7 528 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 REEP4Q9H6H4 257 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 ROPN1Q9HAT0 212 aaPredicted RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 EQTNQ9NQ60 294 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 SDHAF3Q9NRP4 125 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
SIPA1-206ENST00000530226 DNAJC15Q9Y5T4 150 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 SPG11Q96JI7 2443 aa12.85□□□□□ -0.35
SIPA1-206ENST00000530226 NF1P21359 2839 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 KDM4EB2RXH2 506 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TMEM233B4DJY2 109 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TBX19O60806 448 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 IL33O95760 270 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 IL18BPO95998 194 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CHRNGP07510 517 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 LINC00032P0C843 101 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TMIGD3P0DMS9 266 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CHMP24386 653 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CTSSP25774 331 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 DPP4P27487 766 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 ALDH3A1P30838 453 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 RFX3P48380 749 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 LHX2P50458 406 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 GAS1P54826 345 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 DLX5P56178 289 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 DSCR4P56555 118 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 STX5Q13190 355 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 PDE7AQ13946 482 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 PRSS53Q2L4Q9 553 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 OR5M10Q6IEU7 315 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 ANKRD26P1Q6NSI1 321 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 ZNF551Q7Z340 670 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 R3HCC1LQ7Z5L2 792 aaKnown RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CLHC1Q8NHS4 586 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CAVIN3Q969G5 261 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 MTERF3Q96E29 417 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 EGLN2Q96KS0 407 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TUBA1CQ9BQE3 449 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 MECRQ9BV79 373 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 SFXN3Q9BWM7 321 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 TUBB1Q9H4B7 451 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 HHATLQ9HCP6 504 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
SIPA1-206ENST00000530226 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
SIPA1-206ENST00000530226 CLCA1A8K7I4 914 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 SYT5O00445 386 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 PIP5K1BO14986 540 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 AKAP10O43572 662 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 SPAG7O75391 227 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 FGF4P08620 206 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 PRPS2P11908 318 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 TCEA1P23193 301 aaKnown RBP12.83□□□□□ -0.36
SIPA1-206ENST00000530226 SORDQ00796 357 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 SRYQ05066 204 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 FLYWCH1Q4VC44 716 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 RFTN2Q52LD8 501 aaPredicted RBP12.83□□□□□ -0.36
SIPA1-206ENST00000530226 RAET1LQ5VY80 246 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 WDR93Q6P2C0 686 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 Q6ZSR9 355 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 KIF18BQ86Y91 864 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 GRAMD2AQ8IUY3 354 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 ZZZ3Q8IYH5 903 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 FADS6Q8N9I5 356 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 CDRT4Q8N9R6 151 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 C9orf106Q8NAJ2 232 aa12.83□□□□□ -0.36
SIPA1-206ENST00000530226 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms