RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 MID1O15344 667 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC16A6O15403 523 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC25A17O43808 307 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC43A1O75387 559 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ZNF821O75541 412 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 RPP40O75818 363 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ATG12O94817 140 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SUPT7LO94864 414 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ABLIM3O94929 683 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 IFNB1P01574 187 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PPBPP02775 128 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 IFNA6P05013 189 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MMP3P08254 477 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 HTR1AP08908 422 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 OR56A5P0C7T3 313 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 METTL15P1P0C7V9 234 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MYOGP15173 224 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 HIST1H1BP16401 226 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MAGP20916 626 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 NT5EP21589 574 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 UBA1P22314 1058 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PSMB6P28072 239 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TEAD1P28347 426 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ADORA2AP29274 412 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 FMO3P31513 532 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 YWHABP31946 246 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SHMT2P34897 504 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TGFBR2P37173 567 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PMELP40967 661 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CDKN2CP42773 168 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MAGEA6P43360 314 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC1A6P48664 564 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SUOXP51687 545 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ATXN3P54252 364 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 NAGLUP54802 743 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 LINC00205P59089 165 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PRPS1P60891 318 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SNRPEP62304 92 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 BTG1P62324 171 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 RAP1AP62834 184 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 DCDP81605 110 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SORDQ00796 357 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MS4A2Q01362 244 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MC2RQ01718 297 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SP3Q02447 781 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SCN1BQ07699 218 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 C17orf67Q0P5P2 114 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MGAT2Q10469 447 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CNTN1Q12860 1018 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ELAVL2Q12926 359 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 RPA4Q13156 261 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CHIT1Q13231 466 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MAD2L1Q13257 205 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CAMK2DQ13557 499 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SERTAD2Q14140 314 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ARHGEF7Q14155 803 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 FASTKQ14296 549 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 KRT33BQ14525 404 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 IRF3Q14653 427 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TAF1AQ15573 450 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TRAM1Q15629 374 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MPPED2Q15777 294 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MPEG1Q2M385 716 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SBK1Q52WX2 424 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SPOUT1Q5T280 376 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 C9orf64Q5T6V5 341 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 GPRC6AQ5T6X5 926 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ARMC12Q5T9G4 340 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 LCN1P1Q5VSP4 162 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PRAMEF17Q5VTA0 474 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 C1orf94Q6P1W5 598 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SCIMPQ6UWF3 145 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PRSS57Q6UWY2 283 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 BAIAP2L2Q6UXY1 529 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SCARA5Q6ZMJ2 495 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CYS1Q717R9 158 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MEPCEQ7L2J0 689 aaKnown RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC46A3Q7Z3Q1 461 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 IRF2BP2Q7Z5L9 587 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TMCO2Q7Z6W1 182 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 KIAA0907Q7Z7F0 614 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 LHFPL4Q7Z7J7 247 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TCEAL8Q8IYN2 117 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM185AQ8N0U4 392 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 STK40Q8N2I9 435 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 GPR137CQ8N3F9 429 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 CBR4Q8N4T8 237 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 MS4A15Q8N5U1 240 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 L3MBTL4Q8NA19 623 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 UXS1Q8NBZ7 420 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TMEM104Q8NE00 496 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 OR4C15Q8NGM1 316 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 OR2T4Q8NH00 348 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 OR4K15Q8NH41 348 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 OR56A3Q8NH54 315 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 BBS10Q8TAM1 723 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC35G2Q8TBE7 412 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 NEK7Q8TDX7 302 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms